RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 TPRP12270 2363 aaKnown RBP12.63□□□□□ -0.39
SPARC-206ENST00000524277 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.63□□□□□ -0.39
SPARC-206ENST00000524277 AXIN1O15169 862 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 ATP2C2O75185 946 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 EPN2O95208 641 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 EGFP01133 1207 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 CCDC192P0DO97 292 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 PTPN1P18031 435 aaKnown RBP12.63□□□□□ -0.39
SPARC-206ENST00000524277 SLC7A9P82251 487 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 EHHADHQ08426 723 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 PSMD2Q13200 908 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 SRSF5Q13243 272 aaKnown RBP12.63□□□□□ -0.39
SPARC-206ENST00000524277 BMT2Q1RMZ1 405 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 WDR72Q3MJ13 1102 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 TDRD10Q5VZ19 366 aaKnown RBP12.63□□□□□ -0.39
SPARC-206ENST00000524277 SHC4Q6S5L8 630 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 DDX42Q86XP3 938 aaKnown RBP eCLIP12.63□□□□□ -0.39
SPARC-206ENST00000524277 RDH13Q8NBN7 331 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 PDZD8Q8NEN9 1154 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 OR6B3Q8NGW1 331 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 TMEM174Q8WUU8 243 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 SCFD1Q8WVM8 642 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 OVCA2Q8WZ82 227 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 CHFRQ96EP1 664 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 PCED1BQ96HM7 432 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 SLITRK1Q96PX8 696 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 VRTNQ9H8Y1 702 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 C2orf42Q9NWW7 574 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 CFAP45Q9UL16 551 aa12.63□□□□□ -0.39
SPARC-206ENST00000524277 ATP8B3O60423 1300 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 PTPRJQ12913 1337 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 DCDC2BA2VCK2 349 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 C2orf78A6NCI8 922 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 ZNF840PA6NDX5 716 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 CLIC2O15247 247 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 POLR2DO15514 142 aaKnown RBP12.62□□□□□ -0.39
SPARC-206ENST00000524277 RHOBTB1O94844 696 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 RTN3O95197 1032 aaPredicted RBP12.62□□□□□ -0.39
SPARC-206ENST00000524277 APBB3O95704 486 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 CST3P01034 146 aaPredicted RBP12.62□□□□□ -0.39
SPARC-206ENST00000524277 CYP2J2P51589 502 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 PSMC1P62191 440 aaKnown RBP12.62□□□□□ -0.39
SPARC-206ENST00000524277 KNOP1Q1ED39 458 aaKnown RBP12.62□□□□□ -0.39
SPARC-206ENST00000524277 MDH1BQ5I0G3 518 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 SCARA3Q6AZY7 606 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 IL31Q6EBC2 164 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 C12orf50Q8NA57 414 aaPredicted RBP12.62□□□□□ -0.39
SPARC-206ENST00000524277 STKLD1Q8NE28 680 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 GLIS3Q8NEA6 775 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 RPLP0P6Q8NHW5 317 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 RIN3Q8TB24 985 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 HPS3Q969F9 1004 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 CCDC127Q96BQ5 260 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 SLC22A12Q96S37 553 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 MRPL45Q9BRJ2 306 aaKnown RBP12.62□□□□□ -0.39
SPARC-206ENST00000524277 FBRSL1Q9HCM7 1045 aaKnown RBP12.62□□□□□ -0.39
SPARC-206ENST00000524277 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 COMMD8Q9NX08 183 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 WNT6Q9Y6F9 365 aa12.62□□□□□ -0.39
SPARC-206ENST00000524277 A8MXQ7 604 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 F8VP50 259 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 LEFTY2O00292 366 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 HCRTO43612 131 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 EXOC3O60645 756 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 PHACTR2O75167 634 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 OLFM2O95897 454 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 MYL1P05976 194 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 HSP90AA1P07900 732 aaKnown RBP12.61□□□□□ -0.39
SPARC-206ENST00000524277 ZSCAN22P10073 491 aaPredicted RBP12.61□□□□□ -0.39
SPARC-206ENST00000524277 EIF2DP41214 584 aaKnown RBP12.61□□□□□ -0.39
SPARC-206ENST00000524277 ME1P48163 572 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 DMC1Q14565 340 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 ELF2Q15723 593 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 HSF5Q4G112 596 aaPredicted RBP12.61□□□□□ -0.39
SPARC-206ENST00000524277 PREPLQ4J6C6 727 aaPredicted RBP12.61□□□□□ -0.39
SPARC-206ENST00000524277 AASDHQ4L235 1098 aaPredicted RBP12.61□□□□□ -0.39
SPARC-206ENST00000524277 PKN3Q6P5Z2 889 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 NELFCDQ8IXH7 590 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 CEP57L1Q8IYX8 460 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 ADGRG2Q8IZP9 1017 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 NUP93Q8N1F7 819 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 FAM84AQ96KN4 292 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 TNIP3Q96KP6 325 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 ARRDC1-AS1Q9H2J1 176 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 TBC1D14Q9P2M4 693 aa12.61□□□□□ -0.39
SPARC-206ENST00000524277 OAS1P00973 400 aaKnown RBP12.6□□□□□ -0.39
SPARC-206ENST00000524277 RPN1P04843 607 aaKnown RBP12.6□□□□□ -0.39
SPARC-206ENST00000524277 ADRB1P08588 477 aa12.6□□□□□ -0.39
SPARC-206ENST00000524277 P4HA1P13674 534 aa12.6□□□□□ -0.39
SPARC-206ENST00000524277 TRIM21P19474 475 aaKnown RBP12.6□□□□□ -0.39
SPARC-206ENST00000524277 YWHAQP27348 245 aa12.6□□□□□ -0.39
SPARC-206ENST00000524277 USP46P62068 366 aa12.6□□□□□ -0.39
SPARC-206ENST00000524277 CLDN10P78369 228 aa12.6□□□□□ -0.39
SPARC-206ENST00000524277 MRPS21P82921 87 aaKnown RBP12.6□□□□□ -0.39
SPARC-206ENST00000524277 CCDC142Q17RM4 750 aa12.6□□□□□ -0.39
SPARC-206ENST00000524277 USP39Q53GS9 565 aaKnown RBP12.6□□□□□ -0.39
SPARC-206ENST00000524277 ZNF667Q5HYK9 610 aa12.6□□□□□ -0.39
SPARC-206ENST00000524277 PLA2G2CQ5R387 149 aa12.6□□□□□ -0.39
SPARC-206ENST00000524277 RESP18Q5W5W9 173 aa12.6□□□□□ -0.39
SPARC-206ENST00000524277 KBTBD6Q86V97 674 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms