RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 SLC15A5A6NIM6 579 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 NEMP1O14524 444 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 ZNF862O60290 1169 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 ETFBP38117 255 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 AGBL2Q5U5Z8 902 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 SLC25A41Q8N5S1 370 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 SLC2A14Q8TDB8 520 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 EDEM1Q92611 657 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 LRRC37BQ96QE4 947 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 RARAP10276 462 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 MAP2K5Q13163 448 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 AADACL2Q6P093 401 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 FAM71AQ8IYT1 594 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 EPS8L3Q8TE67 593 aaKnown RBP13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 TFB1MQ8WVM0 346 aaKnown RBP13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 XPO6Q96QU8 1125 aaKnown RBP13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 PCMTD2Q9NV79 361 aa13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 REXO2Q9Y3B8 237 aaKnown RBP13.62□□□□□ -0.23
PCDHGB1-201ENST00000523390 BTBD19C9JJ37 291 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 PMPCBO75439 489 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 LSP1P33241 339 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 NNMTP40261 264 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 ADIGQ0VDE8 80 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 CTXN3Q4LDR2 81 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 TAS2R42Q7RTR8 314 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 IRF2BP2Q7Z5L9 587 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 DEFB128Q7Z7B8 93 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 SLFN11Q7Z7L1 901 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 HIPK4Q8NE63 616 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 CDC26Q8NHZ8 85 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 BCAS3Q9H6U6 928 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 CATSPERBQ9H7T0 1116 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 ZFP69BQ9UJL9 534 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 F8VP50 259 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 NFIL3Q16649 462 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 EFHBQ8N7U6 833 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 FAM8A1Q9UBU6 413 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 ZNF214Q9UL59 606 aaPredicted RBP13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 SNCAIPQ9Y6H5 919 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 NRCAMQ92823 1304 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 GOLGA8QA0A0J9YX86 632 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 GOLGA8OA6NCC3 632 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 FAM47DPA6NHR8 397 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 DCDC2CA8MYV0 355 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 GOLGA8NF8WBI6 632 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 EIF3HO15372 352 aaKnown RBP eCLIP13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 HAUS5O94927 633 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 SMIM10L2AP0DMW4 78 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 SMIM10L2BP0DMW5 78 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 SLC8A1P32418 973 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 LHX1P48742 406 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 IRAK1P51617 712 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 ART3Q13508 389 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 CCNG2Q16589 344 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 ANO4Q32M45 955 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 OVOS1Q6IE37 1185 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 SPATA24Q86W54 205 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 SHISA4Q96DD7 197 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 VCPIP1Q96JH7 1222 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 RPRD1AQ96P16 312 aaPredicted RBP13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 AVENQ9NQS1 362 aaPredicted RBP13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 BAZ2AQ9UIF9 1905 aaKnown RBP13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 E5RI56 91 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 E5RJQ4 531 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 YWHAHQ04917 246 aaPredicted RBP13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 RGMBQ6NW40 437 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 DENND1BQ6P3S1 775 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 PPHLN1Q8NEY8 458 aaKnown RBP13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 FBXO32Q969P5 355 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 CDC42EP4Q9H3Q1 356 aaKnown RBP13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 LMCD1Q9NZU5 365 aa13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 SMG5Q9UPR3 1016 aaKnown RBP13.61□□□□□ -0.23
PCDHGB1-201ENST00000523390 PQBP1O60828 265 aaKnown RBP13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 SETSIPP0DME0 302 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 HNRNPH3P31942 346 aaKnown RBP13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 RTP1P59025 263 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 BFSP2Q13515 415 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 PDK2Q15119 407 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 HABP4Q5JVS0 413 aaKnown RBP13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 DENND5BQ6ZUT9 1274 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 TMEM139Q8IV31 216 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 GPR20Q99678 358 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 ROPN1BQ9BZX4 212 aaPredicted RBP13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 ROPN1Q9HAT0 212 aaPredicted RBP13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 KCND1Q9NSA2 647 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 PCDHA3Q9Y5H8 950 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 ZNF268Q14587 947 aaPredicted RBP13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 FRA10AC1Q70Z53 315 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 ZBTB10Q96DT7 871 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 EPN3Q9H201 632 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 SEMA4AQ9H3S1 761 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 MARCOQ9UEW3 520 aaPredicted RBP13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 LSM7Q9UK45 103 aaKnown RBP13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 M0R2N6 131 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 CHEK2O96017 543 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 PAEPP09466 180 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 RARGP13631 454 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 ALDH1A3P47895 512 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 FMO1Q01740 532 aa13.6□□□□□ -0.23
PCDHGB1-201ENST00000523390 RAD51Q06609 339 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms