RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 AMBRA1Q9C0C7 1298 aa5.9□□□□□ -1.46
SKP1-211ENST00000523359 CXorf36Q9H7Y0 433 aa5.9□□□□□ -1.46
SKP1-211ENST00000523359 TBCCD1Q9NVR7 557 aa5.9□□□□□ -1.46
SKP1-211ENST00000523359 RGS17Q9UGC6 210 aaPredicted RBP5.9□□□□□ -1.46
SKP1-211ENST00000523359 MAN2B2Q9Y2E5 1009 aa5.9□□□□□ -1.46
SKP1-211ENST00000523359 CEP83Q9Y592 693 aa5.9□□□□□ -1.46
SKP1-211ENST00000523359 RPS6KL1Q9Y6S9 549 aa5.9□□□□□ -1.46
SKP1-211ENST00000523359 KAT6AQ92794 2004 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 A1BGP04217 495 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 EGR2P11161 476 aaPredicted RBP5.89□□□□□ -1.47
SKP1-211ENST00000523359 PPM1AP35813 382 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 PTDSS1P48651 473 aaKnown RBP5.89□□□□□ -1.47
SKP1-211ENST00000523359 PRKAG1P54619 331 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 CHAF1AQ13111 956 aaPredicted RBP5.89□□□□□ -1.47
SKP1-211ENST00000523359 STK3Q13188 491 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 E2F2Q14209 437 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 SF3B3Q15393 1217 aaKnown RBP5.89□□□□□ -1.47
SKP1-211ENST00000523359 NPY5RQ15761 445 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 MPEG1Q2M385 716 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 LY6G5CQ5SRR4 150 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 ICE2Q659A1 982 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 SFRP4Q6FHJ7 346 aaPredicted RBP5.89□□□□□ -1.47
SKP1-211ENST00000523359 CATSPERGQ6ZRH7 1159 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 FANCBQ8NB91 859 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 B3GALNT2Q8NCR0 500 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 PPP2R3CQ969Q6 453 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 ZNF566Q969W8 418 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 NELL2Q99435 816 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 DNMT3BQ9UBC3 853 aaKnown RBP5.89□□□□□ -1.47
SKP1-211ENST00000523359 SERTAD3Q9UJW9 196 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 CDY1Q9Y6F8 540 aa5.89□□□□□ -1.47
SKP1-211ENST00000523359 POLR2AP24928 1970 aaKnown RBP5.88□□□□□ -1.47
SKP1-211ENST00000523359 CLCA1A8K7I4 914 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 F5H423 210 aaPredicted RBP5.88□□□□□ -1.47
SKP1-211ENST00000523359 AREL1O15033 823 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 RRP9O43818 475 aaKnown RBP5.88□□□□□ -1.47
SKP1-211ENST00000523359 RAMP2O60895 175 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 RASAL1O95294 804 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 NDST3O95803 873 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 PDHA1P08559 390 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 MYL4P12829 197 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 TPH1P17752 444 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 KRT4P19013 534 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 EEF1GP26641 437 aaKnown RBP5.88□□□□□ -1.47
SKP1-211ENST00000523359 PPIFP30405 207 aaKnown RBP5.88□□□□□ -1.47
SKP1-211ENST00000523359 IL6STP40189 918 aaPredicted RBP5.88□□□□□ -1.47
SKP1-211ENST00000523359 HSPA7P48741 367 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 NANOS3P60323 173 aaKnown RBP5.88□□□□□ -1.47
SKP1-211ENST00000523359 SP2Q02086 613 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 ZNF750Q32MQ0 723 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 PTCHD3Q3KNS1 767 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 KRTAP15-1Q3LI76 137 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 PLAG1Q6DJT9 500 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 SLC15A3Q8IY34 581 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 SYTL1Q8IYJ3 562 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 VGLL2Q8N8G2 317 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 SMCR8Q8TEV9 937 aaPredicted RBP5.88□□□□□ -1.47
SKP1-211ENST00000523359 PNISRQ8TF01 805 aaKnown RBP5.88□□□□□ -1.47
SKP1-211ENST00000523359 TMEM171Q8WVE6 324 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 Q96MF0 132 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 AGAP2Q99490 1192 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 TTPALQ9BTX7 342 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 ACTRT3Q9BYD9 372 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 DHX36Q9H2U1 1008 aaKnown RBP5.88□□□□□ -1.47
SKP1-211ENST00000523359 SERHL2Q9H4I8 314 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 CASS4Q9NQ75 786 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 TRMT13Q9NUP7 481 aaKnown RBP5.88□□□□□ -1.47
SKP1-211ENST00000523359 SSX2IPQ9Y2D8 614 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 DMRT1Q9Y5R6 373 aa5.88□□□□□ -1.47
SKP1-211ENST00000523359 A0A087WZ62 844 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 PIPSLA2A3N6 862 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 PPM1DO15297 605 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 RGS10O43665 173 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 SRGAP2O75044 1071 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 PIAS2O75928 621 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 INMTO95050 263 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 CSF1RP07333 972 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 SRGNP10124 158 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 PAX3P23760 479 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 ADORA2AP29274 412 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 KCNAB1Q14722 419 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 PCSK4Q6UW60 755 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 Q6ZPA2 131 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 ULK2Q8IYT8 1036 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 SPARTQ8N0X7 666 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 TOR1AIP2Q8NFQ8 470 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 DNAJB14Q8TBM8 379 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 MYCBPAPQ8TBZ2 947 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 POF1BQ8WVV4 589 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 CRB3Q9BUF7 120 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 WDR12Q9GZL7 423 aaKnown RBP5.87□□□□□ -1.47
SKP1-211ENST00000523359 HEYLQ9NQ87 328 aaPredicted RBP5.87□□□□□ -1.47
SKP1-211ENST00000523359 DKK4Q9UBT3 224 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 CAPN11Q9UMQ6 739 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 LRCH1Q9Y2L9 728 aa5.87□□□□□ -1.47
SKP1-211ENST00000523359 EXOC5O00471 708 aa5.86□□□□□ -1.47
SKP1-211ENST00000523359 SH3BP5O60239 455 aa5.86□□□□□ -1.47
SKP1-211ENST00000523359 MCCP23508 829 aa5.86□□□□□ -1.47
SKP1-211ENST00000523359 ZEB1P37275 1124 aaPredicted RBP5.86□□□□□ -1.47
SKP1-211ENST00000523359 TECP42680 631 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms