RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 HOXA6P31267 233 aa16.48■□□□□ 0.23
MRPS28-209ENST00000522987 NASPP49321 788 aaPredicted RBP16.48■□□□□ 0.23
MRPS28-209ENST00000522987 AMPD2Q01433 879 aa16.48■□□□□ 0.23
MRPS28-209ENST00000522987 DMC1Q14565 340 aa16.48■□□□□ 0.23
MRPS28-209ENST00000522987 C2orf27AQ580R0 203 aa16.48■□□□□ 0.23
MRPS28-209ENST00000522987 STXBP4Q6ZWJ1 553 aa16.48■□□□□ 0.23
MRPS28-209ENST00000522987 SFTPA1Q8IWL2 248 aa16.48■□□□□ 0.23
MRPS28-209ENST00000522987 FSIP1Q8NA03 581 aa16.48■□□□□ 0.23
MRPS28-209ENST00000522987 OR6B3Q8NGW1 331 aa16.48■□□□□ 0.23
MRPS28-209ENST00000522987 ATP2A3Q93084 1043 aa16.48■□□□□ 0.23
MRPS28-209ENST00000522987 PCED1BQ96HM7 432 aa16.48■□□□□ 0.23
MRPS28-209ENST00000522987 FUBP3Q96I24 572 aaKnown RBP eCLIP16.48■□□□□ 0.23
MRPS28-209ENST00000522987 SNX25Q9H3E2 840 aa16.48■□□□□ 0.23
MRPS28-209ENST00000522987 ADAMTS9Q9P2N4 1935 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 TGFB1I1O43294 461 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 EPN2O95208 641 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 ADRB1P08588 477 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 WARSP23381 471 aaKnown RBP16.47■□□□□ 0.23
MRPS28-209ENST00000522987 MAGEA11P43364 429 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 DGKEP52429 567 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 SNRNP35Q16560 246 aaKnown RBP16.47■□□□□ 0.23
MRPS28-209ENST00000522987 FAM26FQ5R3K3 315 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 IL31Q6EBC2 164 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 SHC4Q6S5L8 630 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 DENND5BQ6ZUT9 1274 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 WDR49Q8IV35 697 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 CCDC33Q8N5R6 958 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 TNMDQ9H2S6 317 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 ZSCAN16Q9H4T2 348 aaPredicted RBP16.47■□□□□ 0.23
MRPS28-209ENST00000522987 ZDHHC4Q9NPG8 344 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 AGPAT3Q9NRZ7 376 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 TMEM30AQ9NV96 361 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 KBTBD4Q9NVX7 518 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 TRPM5Q9NZQ8 1165 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 NXF1Q9UBU9 619 aaKnown RBP16.47■□□□□ 0.23
MRPS28-209ENST00000522987 ACACBO00763 2458 aa16.47■□□□□ 0.23
MRPS28-209ENST00000522987 K7ELQ4 463 aaPredicted RBP16.46■□□□□ 0.23
MRPS28-209ENST00000522987 LEFTY2O00292 366 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 GBP1P32455 592 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 GNL1P36915 607 aaPredicted RBP16.46■□□□□ 0.23
MRPS28-209ENST00000522987 MPLP40238 635 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 AFMP43652 599 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 RAP1GAPP47736 663 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 CASP4P49662 377 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 MYL6P60660 151 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 SURF1Q15526 300 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 PLK5Q496M5 336 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 EPM2AIP1Q7L775 607 aaPredicted RBP16.46■□□□□ 0.23
MRPS28-209ENST00000522987 DPH6Q7L8W6 267 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 LIMS2Q7Z4I7 341 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 FILIP1Q7Z7B0 1213 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 GRAMD1CQ8IYS0 662 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 SPATA18Q8TC71 538 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 ZNF516Q92618 1163 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 FNBP1Q96RU3 617 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 CGRRF1Q99675 332 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 ZNF518BQ9C0D4 1074 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 RNF38Q9H0F5 515 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 DUSP15Q9H1R2 295 aaPredicted RBP16.46■□□□□ 0.23
MRPS28-209ENST00000522987 SLC39A2Q9NP94 309 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 CPQQ9Y646 472 aa16.46■□□□□ 0.23
MRPS28-209ENST00000522987 SOBPA7XYQ1 873 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 KIAA0391O15091 583 aaKnown RBP16.45■□□□□ 0.22
MRPS28-209ENST00000522987 PTPN1P18031 435 aaKnown RBP16.45■□□□□ 0.22
MRPS28-209ENST00000522987 OPRD1P41143 372 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 SLC6A11P48066 632 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 TNNC1P63316 161 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 CREB5Q02930 508 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 CYP24A1Q07973 514 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 MESP2Q0VG99 397 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 NR1H3Q13133 447 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 WDR72Q3MJ13 1102 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 VSTM1Q6UX27 236 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 SCARA5Q6ZMJ2 495 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 MYCBPAPQ8TBZ2 947 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 ZNF507Q8TCN5 953 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 SCFD1Q8WVM8 642 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 INTS4Q96HW7 963 aaKnown RBP16.45■□□□□ 0.22
MRPS28-209ENST00000522987 SPATA17Q96L03 361 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 ZNF396Q96N95 335 aaPredicted RBP16.45■□□□□ 0.22
MRPS28-209ENST00000522987 CIZ1Q9ULV3 898 aaPredicted RBP16.45■□□□□ 0.22
MRPS28-209ENST00000522987 ARHGAP26Q9UNA1 814 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 PI4KAP42356 2102 aa16.45■□□□□ 0.22
MRPS28-209ENST00000522987 GON4LQ3T8J9 2241 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 A8MXQ7 604 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 TRIM66O15016 1216 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 EIF3DO15371 548 aaKnown RBP eCLIP16.44■□□□□ 0.22
MRPS28-209ENST00000522987 POLR2DO15514 142 aaKnown RBP16.44■□□□□ 0.22
MRPS28-209ENST00000522987 CUTAO60888 179 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 PHACTR2O75167 634 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 NFATC1O95644 943 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 APBB3O95704 486 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 CYP17A1P05093 508 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 ZNF806P0C7X5 589 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 CDH8P55286 799 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 KDSRQ06136 332 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 TAF10Q12962 218 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 TRPC3Q13507 836 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 PSMD6Q15008 389 aa16.44■□□□□ 0.22
MRPS28-209ENST00000522987 MAPRE1Q15691 268 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms