RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 NELL2Q99435 816 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 RSRP1Q9BUV0 290 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 DSCC1Q9BVC3 393 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 PHF20Q9BVI0 1012 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 XYLT2Q9H1B5 865 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 SMOC1Q9H4F8 434 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 CNNM2Q9H8M5 875 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 MIOSQ9NXC5 875 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 ADAM30Q9UKF2 790 aa7.43□□□□□ -1.22
SDCBP-210ENST00000522843 NDRG2Q9UN36 371 aaKnown RBP7.43□□□□□ -1.22
SDCBP-210ENST00000522843 NAV2Q8IVL1 2488 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 IGLV3-22A0A075B6J6 115 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 A0A087WZ62 844 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 IFIT3O14879 490 aaKnown RBP7.42□□□□□ -1.22
SDCBP-210ENST00000522843 NCAM2O15394 837 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 PSPNO60542 156 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 C1RP00736 705 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 FCARP24071 287 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 KIF5BP33176 963 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 FAM160A1Q05DH4 1040 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 DSC1Q08554 894 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 DUSP4Q13115 394 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 TARBP2Q15633 366 aaKnown RBP7.42□□□□□ -1.22
SDCBP-210ENST00000522843 UGCGQ16739 394 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 IMMTQ16891 758 aaKnown RBP7.42□□□□□ -1.22
SDCBP-210ENST00000522843 AASDHQ4L235 1098 aaPredicted RBP7.42□□□□□ -1.22
SDCBP-210ENST00000522843 TWF2Q6IBS0 349 aaKnown RBP7.42□□□□□ -1.22
SDCBP-210ENST00000522843 MIS18BP1Q6P0N0 1132 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 MTSS1LQ765P7 747 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.42□□□□□ -1.22
SDCBP-210ENST00000522843 MRPL10Q7Z7H8 261 aaKnown RBP7.42□□□□□ -1.22
SDCBP-210ENST00000522843 SMC5Q8IY18 1101 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 CKAP2LQ8IYA6 745 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 ANKS4BQ8N8V4 417 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 IGDCC4Q8TDY8 1250 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 FDXACB1Q9BRP7 624 aaPredicted RBP7.42□□□□□ -1.22
SDCBP-210ENST00000522843 ARRDC1-AS1Q9H2J1 176 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 LMAN1LQ9HAT1 526 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 HCFC1R1Q9NWW0 138 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 GABBR1Q9UBS5 961 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 STK39Q9UEW8 545 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 EBF1Q9UH73 591 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 DPP7Q9UHL4 492 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 FBXW11Q9UKB1 542 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 PIN4Q9Y237 131 aaKnown RBP7.42□□□□□ -1.22
SDCBP-210ENST00000522843 PCDHB2Q9Y5E7 798 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 SPAG17Q6Q759 2223 aa7.42□□□□□ -1.22
SDCBP-210ENST00000522843 ADAMTS3O15072 1205 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 CCL16O15467 120 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 ADAM12O43184 909 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 ECI2O75521 394 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 STBD1O95210 358 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 BPNT1O95861 308 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 CYP21A2P08686 494 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 ZNF806P0C7X5 589 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 CHRNB1P11230 501 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 SMARCA1P28370 1054 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 OR1G1P47890 313 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 CXCL12P48061 93 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 CCR3P51677 355 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 SLC5A9Q2M3M2 681 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 SKOR2Q2VWA4 1001 aaPredicted RBP7.41□□□□□ -1.22
SDCBP-210ENST00000522843 ANKRD45Q5TZF3 282 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 TANGO2Q6ICL3 276 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 TCEAL6Q6IPX3 200 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 PRSS55Q6UWB4 352 aaPredicted RBP7.41□□□□□ -1.22
SDCBP-210ENST00000522843 CRYGNQ8WXF5 182 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 ING5Q8WYH8 240 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 TCEAL3Q969E4 200 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 RILPL2Q969X0 211 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 SIGLEC10Q96LC7 697 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 BBC3Q96PG8 261 aaPredicted RBP7.41□□□□□ -1.22
SDCBP-210ENST00000522843 ANO3Q9BYT9 981 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 GCOM2Q9BZD3 368 aaPredicted RBP7.41□□□□□ -1.22
SDCBP-210ENST00000522843 RSAD1Q9HA92 442 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 FNIP2Q9P278 1114 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 DNMT3BQ9UBC3 853 aaKnown RBP7.41□□□□□ -1.22
SDCBP-210ENST00000522843 SSX2IPQ9Y2D8 614 aa7.41□□□□□ -1.22
SDCBP-210ENST00000522843 IGKV6-21A0A0C4DH24 114 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 TMEM150BA6NC51 233 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 OR14I1A6ND48 311 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 TMEM8BA6NDV4 472 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 EPN2O95208 641 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 PAPSS2O95340 614 aaPredicted RBP7.4□□□□□ -1.22
SDCBP-210ENST00000522843 CAPNS1P04632 268 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 RXRAP19793 462 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 GARTP22102 1010 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 TMOD1P28289 359 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 HOXA11P31270 313 aaPredicted RBP7.4□□□□□ -1.22
SDCBP-210ENST00000522843 SREBF1P36956 1147 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 RAB27AP51159 221 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 RTP2Q5QGT7 225 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 HEATR6Q6AI08 1181 aaKnown RBP7.4□□□□□ -1.22
SDCBP-210ENST00000522843 WWC2Q6AWC2 1192 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 Q6ZS52 159 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 NIPA1Q7RTP0 329 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 CATIPQ7Z7H3 387 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 LONP2Q86WA8 852 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 PLA2G4DQ86XP0 818 aa7.4□□□□□ -1.22
SDCBP-210ENST00000522843 ZNF654Q8IZM8 581 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms