RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 JAKMIP2Q96AA8 810 aa18.96■□□□□ 0.63
CLK4-211ENST00000522556 SMARCD1Q96GM5 515 aa18.96■□□□□ 0.63
CLK4-211ENST00000522556 ZFYVE19Q96K21 471 aa18.96■□□□□ 0.63
CLK4-211ENST00000522556 TTLL2Q9BWV7 592 aa18.96■□□□□ 0.63
CLK4-211ENST00000522556 NT5C1AQ9BXI3 368 aa18.96■□□□□ 0.63
CLK4-211ENST00000522556 TRPC7Q9HCX4 862 aa18.96■□□□□ 0.63
CLK4-211ENST00000522556 ARHGEF3Q9NR81 526 aa18.96■□□□□ 0.63
CLK4-211ENST00000522556 WNT16Q9UBV4 365 aa18.96■□□□□ 0.63
CLK4-211ENST00000522556 GDI1P31150 447 aa18.95■□□□□ 0.62
CLK4-211ENST00000522556 PGFP49763 221 aa18.95■□□□□ 0.62
CLK4-211ENST00000522556 APBA1Q02410 837 aa18.95■□□□□ 0.62
CLK4-211ENST00000522556 CREBRFQ8IUR6 639 aa18.95■□□□□ 0.62
CLK4-211ENST00000522556 CMTM8Q8IZV2 173 aa18.95■□□□□ 0.62
CLK4-211ENST00000522556 USP13Q92995 863 aaPredicted RBP18.95■□□□□ 0.62
CLK4-211ENST00000522556 CYP2S1Q96SQ9 504 aa18.95■□□□□ 0.62
CLK4-211ENST00000522556 FOXQ1Q9C009 403 aa18.95■□□□□ 0.62
CLK4-211ENST00000522556 DMAP1Q9NPF5 467 aaPredicted RBP18.95■□□□□ 0.62
CLK4-211ENST00000522556 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.95■□□□□ 0.62
CLK4-211ENST00000522556 ARNTLO00327 626 aa18.94■□□□□ 0.62
CLK4-211ENST00000522556 TNFRSF10BO14763 440 aa18.94■□□□□ 0.62
CLK4-211ENST00000522556 AFPP02771 609 aaKnown RBP18.94■□□□□ 0.62
CLK4-211ENST00000522556 CD72P21854 359 aa18.94■□□□□ 0.62
CLK4-211ENST00000522556 SLC5A3P53794 718 aa18.94■□□□□ 0.62
CLK4-211ENST00000522556 MAP3K7CLP57077 242 aa18.94■□□□□ 0.62
CLK4-211ENST00000522556 TAF10Q12962 218 aa18.94■□□□□ 0.62
CLK4-211ENST00000522556 PPP1R26Q5T8A7 1209 aaPredicted RBP18.94■□□□□ 0.62
CLK4-211ENST00000522556 CLEC20AQ6ZU45 233 aa18.94■□□□□ 0.62
CLK4-211ENST00000522556 C11orf57Q6ZUT1 292 aaPredicted RBP18.94■□□□□ 0.62
CLK4-211ENST00000522556 MRPS31Q92665 395 aaKnown RBP18.94■□□□□ 0.62
CLK4-211ENST00000522556 CYFIP2Q96F07 1278 aa18.94■□□□□ 0.62
CLK4-211ENST00000522556 HNRNPABQ99729 332 aaKnown RBP18.94■□□□□ 0.62
CLK4-211ENST00000522556 TRMT61BQ9BVS5 477 aaKnown RBP18.94■□□□□ 0.62
CLK4-211ENST00000522556 GPR88Q9GZN0 384 aa18.94■□□□□ 0.62
CLK4-211ENST00000522556 MFSD1Q9H3U5 465 aa18.94■□□□□ 0.62
CLK4-211ENST00000522556 TBC1D17Q9HA65 648 aa18.94■□□□□ 0.62
CLK4-211ENST00000522556 HEBP1Q9NRV9 189 aa18.94■□□□□ 0.62
CLK4-211ENST00000522556 TMEM63CQ9P1W3 806 aa18.94■□□□□ 0.62
CLK4-211ENST00000522556 UXTQ9UBK9 157 aaPredicted RBP18.94■□□□□ 0.62
CLK4-211ENST00000522556 HHLA1C9JL84 531 aa18.93■□□□□ 0.62
CLK4-211ENST00000522556 GOLGA6L22H0YM25 854 aa18.93■□□□□ 0.62
CLK4-211ENST00000522556 PMM2O15305 246 aa18.93■□□□□ 0.62
CLK4-211ENST00000522556 GNA14O95837 355 aa18.93■□□□□ 0.62
CLK4-211ENST00000522556 CCDC192P0DO97 292 aa18.93■□□□□ 0.62
CLK4-211ENST00000522556 PSMC3P17980 439 aa18.93■□□□□ 0.62
CLK4-211ENST00000522556 ACO1P21399 889 aaKnown RBP18.93■□□□□ 0.62
CLK4-211ENST00000522556 AVPR2P30518 371 aa18.93■□□□□ 0.62
CLK4-211ENST00000522556 RRAGAQ7L523 313 aa18.93■□□□□ 0.62
CLK4-211ENST00000522556 MON1AQ86VX9 555 aa18.93■□□□□ 0.62
CLK4-211ENST00000522556 MFSD6LQ8IWD5 586 aa18.93■□□□□ 0.62
CLK4-211ENST00000522556 SUGP1Q8IWZ8 645 aaKnown RBP18.93■□□□□ 0.62
CLK4-211ENST00000522556 ARL14EPQ8N8R7 260 aaPredicted RBP18.93■□□□□ 0.62
CLK4-211ENST00000522556 INTS2Q9H0H0 1204 aaKnown RBP18.93■□□□□ 0.62
CLK4-211ENST00000522556 BRD9Q9H8M2 597 aa18.93■□□□□ 0.62
CLK4-211ENST00000522556 CSNK1G1Q9HCP0 422 aa18.93■□□□□ 0.62
CLK4-211ENST00000522556 GCNT4Q9P109 453 aa18.93■□□□□ 0.62
CLK4-211ENST00000522556 ATP8B3O60423 1300 aa18.93■□□□□ 0.62
CLK4-211ENST00000522556 MIA3Q5JRA6 1907 aa18.92■□□□□ 0.62
CLK4-211ENST00000522556 FAM200BP0CF97 657 aa18.92■□□□□ 0.62
CLK4-211ENST00000522556 ZXDBP98169 803 aa18.92■□□□□ 0.62
CLK4-211ENST00000522556 FCHO2Q0JRZ9 810 aa18.92■□□□□ 0.62
CLK4-211ENST00000522556 MLF2Q15773 248 aaPredicted RBP18.92■□□□□ 0.62
CLK4-211ENST00000522556 SLC44A4Q53GD3 710 aa18.92■□□□□ 0.62
CLK4-211ENST00000522556 GJB7Q6PEY0 223 aa18.92■□□□□ 0.62
CLK4-211ENST00000522556 NUP93Q8N1F7 819 aa18.92■□□□□ 0.62
CLK4-211ENST00000522556 PPM1KQ8N3J5 372 aa18.92■□□□□ 0.62
CLK4-211ENST00000522556 TTC8Q8TAM2 541 aa18.92■□□□□ 0.62
CLK4-211ENST00000522556 DEPDC1BQ8WUY9 529 aa18.92■□□□□ 0.62
CLK4-211ENST00000522556 TMEM176AQ96HP8 235 aa18.92■□□□□ 0.62
CLK4-211ENST00000522556 KREMEN1Q96MU8 473 aa18.92■□□□□ 0.62
CLK4-211ENST00000522556 NT5C1BQ96P26 610 aa18.92■□□□□ 0.62
CLK4-211ENST00000522556 CRACR2AQ9BSW2 395 aa18.92■□□□□ 0.62
CLK4-211ENST00000522556 SAMSN1Q9NSI8 373 aaKnown RBP18.92■□□□□ 0.62
CLK4-211ENST00000522556 GMIPQ9P107 970 aa18.92■□□□□ 0.62
CLK4-211ENST00000522556 MTF2Q9Y483 593 aaPredicted RBP18.92■□□□□ 0.62
CLK4-211ENST00000522556 ZNF840PA6NDX5 716 aa18.91■□□□□ 0.62
CLK4-211ENST00000522556 RNF225M0QZC1 329 aaPredicted RBP18.91■□□□□ 0.62
CLK4-211ENST00000522556 SOX9P48436 509 aa18.91■□□□□ 0.62
CLK4-211ENST00000522556 TNK2Q07912 1038 aa18.91■□□□□ 0.62
CLK4-211ENST00000522556 ASTLQ6HA08 431 aaPredicted RBP18.91■□□□□ 0.62
CLK4-211ENST00000522556 PHLDB3Q6NSJ2 640 aa18.91■□□□□ 0.62
CLK4-211ENST00000522556 TPRG1Q6ZUI0 275 aa18.91■□□□□ 0.62
CLK4-211ENST00000522556 TTC30AQ86WT1 665 aa18.91■□□□□ 0.62
CLK4-211ENST00000522556 TTC16Q8NEE8 873 aa18.91■□□□□ 0.62
CLK4-211ENST00000522556 PRSS33Q8NF86 280 aa18.91■□□□□ 0.62
CLK4-211ENST00000522556 FBXO32Q969P5 355 aa18.91■□□□□ 0.62
CLK4-211ENST00000522556 FAXDC2Q96IV6 333 aa18.91■□□□□ 0.62
CLK4-211ENST00000522556 HEXIM2Q96MH2 286 aaKnown RBP18.91■□□□□ 0.62
CLK4-211ENST00000522556 ZSWIM1Q9BR11 485 aa18.91■□□□□ 0.62
CLK4-211ENST00000522556 AJAP1Q9UKB5 411 aaPredicted RBP18.91■□□□□ 0.62
CLK4-211ENST00000522556 WDFY4Q6ZS81 3184 aa18.9■□□□□ 0.62
CLK4-211ENST00000522556 TULP2O00295 520 aa18.9■□□□□ 0.62
CLK4-211ENST00000522556 DPYSL4O14531 572 aa18.9■□□□□ 0.62
CLK4-211ENST00000522556 SCAMP3O14828 347 aaKnown RBP18.9■□□□□ 0.62
CLK4-211ENST00000522556 P4HA2O15460 535 aa18.9■□□□□ 0.62
CLK4-211ENST00000522556 FGFR1OPO95684 399 aaKnown RBP18.9■□□□□ 0.62
CLK4-211ENST00000522556 ABL1P00519 1130 aa18.9■□□□□ 0.62
CLK4-211ENST00000522556 DDX6P26196 483 aaKnown RBP eCLIP18.9■□□□□ 0.62
CLK4-211ENST00000522556 YWHAQP27348 245 aa18.9■□□□□ 0.62
CLK4-211ENST00000522556 ERCC5P28715 1186 aaPredicted RBP18.9■□□□□ 0.62
CLK4-211ENST00000522556 WEE1P30291 646 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms