RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.36□□□□□ -1.71
SKP1-209ENST00000522552 MEX3CQ5U5Q3 659 aaKnown RBP4.36□□□□□ -1.71
SKP1-209ENST00000522552 GARNL3Q5VVW2 1013 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 TMEM132EQ6IEE7 984 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 WDR73Q6P4I2 378 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 USP51Q70EK9 711 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 GLRX5Q86SX6 157 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 KRT73Q86Y46 540 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 YAF2Q8IY57 180 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 CCAR2Q8N163 923 aaKnown RBP4.36□□□□□ -1.71
SKP1-209ENST00000522552 WDTC1Q8N5D0 677 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 ZBTB8BQ8NAP8 495 aaPredicted RBP4.36□□□□□ -1.71
SKP1-209ENST00000522552 ZNF540Q8NDQ6 660 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 SPATA18Q8TC71 538 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 SCFD2Q8WU76 684 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 DEPDC1BQ8WUY9 529 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 NCSTNQ92542 709 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 ZNF653Q96CK0 615 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 SLX1AQ9BQ83 275 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 DUSP23Q9BVJ7 150 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 ANKRD2Q9GZV1 360 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 USP40Q9NVE5 1235 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 TAB2Q9NYJ8 693 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 NDUFAF4Q9P032 175 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 MYOTQ9UBF9 498 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 RABL2AQ9UBK7 228 aaPredicted RBP4.36□□□□□ -1.71
SKP1-209ENST00000522552 ASH2LQ9UBL3 628 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 FBLN5Q9UBX5 448 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 FTSJ1Q9UET6 329 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 RGS17Q9UGC6 210 aaPredicted RBP4.36□□□□□ -1.71
SKP1-209ENST00000522552 CORO1CQ9ULV4 474 aaPredicted RBP4.36□□□□□ -1.71
SKP1-209ENST00000522552 CA14Q9ULX7 337 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 CAPN6Q9Y6Q1 641 aa4.36□□□□□ -1.71
SKP1-209ENST00000522552 A0A0U1RQK1 487 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 ZNF320A2RRD8 509 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 A8MV72 311 aaPredicted RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 WASH4PA8MWX3 477 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 NDC80O14777 642 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 PSMA7O14818 248 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 NRP2O60462 931 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 SYNCRIPO60506 623 aaKnown RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 PPP6R2O75170 966 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 ENTPD3O75355 529 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 LEFTY1O75610 366 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 STAM2O75886 525 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 METTL18O95568 372 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 HLA-DPA1P20036 260 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 MST1P26927 711 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 AKT1P31749 480 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 PIK3CGP48736 1102 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 RBM5P52756 815 aaKnown RBP eCLIP4.35□□□□□ -1.71
SKP1-209ENST00000522552 CSE1LP55060 971 aaKnown RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 GRIN1Q05586 938 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 TDGQ13569 410 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 NFE2L1Q14494 772 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 RPS6KA2Q15349 733 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 NAA35Q5VZE5 725 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 CDPF1Q6NVV7 123 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 KRTAP19-1Q8IUB9 90 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 ULK2Q8IYT8 1036 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 FMR1NBQ8N0W7 255 aaPredicted RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 DCAF11Q8TEB1 546 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 GRK7Q8WTQ7 553 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 ZNF606Q8WXB4 792 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 PGAP3Q96FM1 320 aaPredicted RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 HIST1H2AHQ96KK5 128 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 HIST1H2AJQ99878 128 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 PHF7Q9BWX1 381 aaPredicted RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 BRD8Q9H0E9 1235 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 NELFAQ9H3P2 528 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 OPA3Q9H6K4 179 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 COPS7BQ9H9Q2 264 aaPredicted RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 ARHGAP20Q9P2F6 1191 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 DNAJB9Q9UBS3 223 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 ANAPC5Q9UJX4 755 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 ACSL6Q9UKU0 697 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 CCL27Q9Y4X3 112 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 EPN1Q9Y6I3 576 aaPredicted RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 RPTORQ8N122 1335 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 A0A087WWL8 130 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 FAM90A18PA6NE21 464 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 FAM90A16PA6NEW6 464 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 FAM90A9PA6NNJ1 464 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 FAM90A5PA8MXJ8 464 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 H0YAE9 185 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 RAB27BO00194 218 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 MSTNO14793 375 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 HGSO14964 777 aaPredicted RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 MUSKO15146 869 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 TGFB1I1O43294 461 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 HNRNPRO43390 633 aaKnown RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 DYRK3O43781 588 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 KERAO60938 352 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 SOCS5O75159 536 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 CSPG5O95196 566 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 MPIG6BO95866 241 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 TFRCP02786 760 aaKnown RBP4.35□□□□□ -1.71
SKP1-209ENST00000522552 PROCP04070 461 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 ANXA6P08133 673 aa4.35□□□□□ -1.71
SKP1-209ENST00000522552 FAM90A15PP0C7V4 464 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms