RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 GABRB2P47870 512 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 RPL34P49207 117 aaKnown RBP13.79□□□□□ -0.2
CPNE3-205ENST00000522240 UBE3AQ05086 875 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 PDE4CQ08493 712 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 IFI16Q16666 785 aaKnown RBP13.79□□□□□ -0.2
CPNE3-205ENST00000522240 SLC39A12Q504Y0 691 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 KIAA1841Q6NSI8 718 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 MMS22LQ6ZRQ5 1243 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 NYAP1Q6ZVC0 841 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 TAS1R1Q7RTX1 841 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 SPATA2LQ8IUW3 424 aaPredicted RBP13.79□□□□□ -0.2
CPNE3-205ENST00000522240 RNF10Q8N5U6 811 aaKnown RBP13.79□□□□□ -0.2
CPNE3-205ENST00000522240 UBA3Q8TBC4 463 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 ATRIPQ8WXE1 791 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 RIN2Q8WYP3 895 aaPredicted RBP13.79□□□□□ -0.2
CPNE3-205ENST00000522240 B3GALT6Q96L58 329 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 HSFY1Q96LI6 401 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 CPXM1Q96SM3 734 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 SLC4A5Q9BY07 1137 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 ZBP1Q9H171 429 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 CSNK1G1Q9HCP0 422 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 DMAP1Q9NPF5 467 aaPredicted RBP13.79□□□□□ -0.2
CPNE3-205ENST00000522240 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.79□□□□□ -0.2
CPNE3-205ENST00000522240 TMLHEQ9NVH6 421 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 WDR35Q9P2L0 1181 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 UVRAGQ9P2Y5 699 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 CNOT8Q9UFF9 292 aaKnown RBP13.79□□□□□ -0.2
CPNE3-205ENST00000522240 SCINQ9Y6U3 715 aa13.79□□□□□ -0.2
CPNE3-205ENST00000522240 TTC28Q96AY4 2481 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 KIF2AO00139 706 aaPredicted RBP13.78□□□□□ -0.2
CPNE3-205ENST00000522240 CLDN5O00501 218 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 KIF5CO60282 957 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 AP1G2O75843 785 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 GABBR2O75899 941 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 TUBB4AP04350 444 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 CTSAP10619 480 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 CPB1P15086 417 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 SCNN1AP37088 669 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 MAGEA11P43364 429 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 RABGGTBP53611 331 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 GPR17Q13304 367 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 VSTM1Q6UX27 236 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 CLEC20AQ6ZU45 233 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 Q7L0L9 218 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 LRRTM3Q86VH5 581 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 DNAAF5Q86Y56 855 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 VPS52Q8N1B4 723 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 KLHL23Q8NBE8 558 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 SPPL2BQ8TCT7 592 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 KCTD13Q8WZ19 329 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 C18orf8Q96DM3 657 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 ARHGEF26Q96DR7 871 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 DCBLD2Q96PD2 775 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 UBXN6Q9BZV1 441 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 FNIP2Q9P278 1114 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 TRIM10Q9UDY6 481 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 GUCA1BQ9UMX6 200 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 TFR2Q9UP52 801 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 PCDHB5Q9Y5E4 795 aa13.78□□□□□ -0.2
CPNE3-205ENST00000522240 MTMR11A4FU01 709 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 OR4Q2P0C623 313 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 RRM1P23921 792 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 TAP1Q03518 808 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 ZNF268Q14587 947 aaPredicted RBP13.77□□□□□ -0.21
CPNE3-205ENST00000522240 PTPN14Q15678 1187 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 RAB30Q15771 203 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 PLEKHA7Q6IQ23 1121 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 PMF1Q6P1K2 205 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 PRSS55Q6UWB4 352 aaPredicted RBP13.77□□□□□ -0.21
CPNE3-205ENST00000522240 TMEM110Q86TL2 294 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 ZDHHC17Q8IUH5 632 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 C3orf20Q8ND61 904 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 TRIM58Q8NG06 486 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 SMOQ99835 787 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 C11orf84Q9BUA3 381 aaPredicted RBP13.77□□□□□ -0.21
CPNE3-205ENST00000522240 SYNCQ9H7C4 482 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 MRPL47Q9HD33 250 aaKnown RBP13.77□□□□□ -0.21
CPNE3-205ENST00000522240 MRPL17Q9NRX2 175 aaKnown RBP13.77□□□□□ -0.21
CPNE3-205ENST00000522240 HSFX1Q9UBD0 423 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 LCMT1Q9UIC8 334 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 PCDHGC5Q9Y5F6 944 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 CDY1Q9Y6F8 540 aa13.77□□□□□ -0.21
CPNE3-205ENST00000522240 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.76□□□□□ -0.21
CPNE3-205ENST00000522240 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.76□□□□□ -0.21
CPNE3-205ENST00000522240 TCRBV5S1A1TA0A578 114 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 MACROD2A1Z1Q3 448 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 E5RJQ4 531 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 TULP2O00295 520 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 TRIM66O15016 1216 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 ABL1P00519 1130 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 ERBB2P04626 1255 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 CA3P07451 260 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 BDNFP23560 247 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 MAP3K7CLP57077 242 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 ROR1Q01973 937 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 TPGS2Q68CL5 300 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 DNAJC24Q6P3W2 148 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 RSPO2Q6UXX9 243 aaPredicted RBP13.76□□□□□ -0.21
CPNE3-205ENST00000522240 PIGZQ86VD9 579 aa13.76□□□□□ -0.21
CPNE3-205ENST00000522240 XYLT1Q86Y38 959 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms