RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 PI4K2AQ9BTU6 479 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 CCSER1Q9C0I3 900 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 KCND2Q9NZV8 630 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 LARSQ9P2J5 1176 aaKnown RBP11.94□□□□□ -0.5
CSMD1-210ENST00000521646 HSFX1Q9UBD0 423 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 SIX4Q9UIU6 781 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 RAB23Q9ULC3 237 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 ODF2LQ9ULJ1 636 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 L1RE1Q9UN81 338 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 PCDHB11Q9Y5F2 797 aa11.94□□□□□ -0.5
CSMD1-210ENST00000521646 NBEAQ8NFP9 2946 aa11.93□□□□□ -0.5
CSMD1-210ENST00000521646 A0A087X0B3 334 aa11.93□□□□□ -0.5
CSMD1-210ENST00000521646 GIPC1O14908 333 aa11.93□□□□□ -0.5
CSMD1-210ENST00000521646 TOP3BO95985 862 aaKnown RBP11.93□□□□□ -0.5
CSMD1-210ENST00000521646 SDHBP21912 280 aa11.93□□□□□ -0.5
CSMD1-210ENST00000521646 CYP2F1P24903 491 aa11.93□□□□□ -0.5
CSMD1-210ENST00000521646 RUNX3Q13761 415 aa11.93□□□□□ -0.5
CSMD1-210ENST00000521646 DDR2Q16832 855 aa11.93□□□□□ -0.5
CSMD1-210ENST00000521646 SFR1Q86XK3 245 aa11.93□□□□□ -0.5
CSMD1-210ENST00000521646 PDCL2Q8N4E4 241 aa11.93□□□□□ -0.5
CSMD1-210ENST00000521646 C1orf127Q8N9H9 656 aa11.93□□□□□ -0.5
CSMD1-210ENST00000521646 KDF1Q8NAX2 398 aaPredicted RBP11.93□□□□□ -0.5
CSMD1-210ENST00000521646 GLIS3Q8NEA6 775 aa11.93□□□□□ -0.5
CSMD1-210ENST00000521646 MSANTD3Q96H12 275 aa11.93□□□□□ -0.5
CSMD1-210ENST00000521646 OXCT2Q9BYC2 517 aaPredicted RBP11.93□□□□□ -0.5
CSMD1-210ENST00000521646 DUSP15Q9H1R2 295 aaPredicted RBP11.93□□□□□ -0.5
CSMD1-210ENST00000521646 PARVGQ9HBI0 331 aa11.93□□□□□ -0.5
CSMD1-210ENST00000521646 DPP3Q9NY33 737 aa11.93□□□□□ -0.5
CSMD1-210ENST00000521646 INVSQ9Y283 1065 aa11.93□□□□□ -0.5
CSMD1-210ENST00000521646 CELSR3Q9NYQ7 3312 aa11.93□□□□□ -0.5
CSMD1-210ENST00000521646 HELZP42694 1942 aaKnown RBP11.92□□□□□ -0.5
CSMD1-210ENST00000521646 C2orf78A6NCI8 922 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 ATP2C2O75185 946 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 RPP40O75818 363 aaKnown RBP11.92□□□□□ -0.5
CSMD1-210ENST00000521646 FAM13AO94988 1023 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 ZNF806P0C7X5 589 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 CNR2P34972 360 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 GJA4P35212 333 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 ZNF77Q15935 545 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 PLK5Q496M5 336 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 STPG1Q5TH74 334 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 ARL6IP4Q66PJ3 421 aaKnown RBP11.92□□□□□ -0.5
CSMD1-210ENST00000521646 ADALQ6DHV7 355 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 ARMCX5Q6P1M9 558 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 CEP68Q76N32 757 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 ZNF720Q7Z2F6 126 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 FAM200AQ8TCP9 573 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 DNAJC19Q96DA6 116 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 SAAL1Q96ER3 474 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 LINC00597Q9H2U6 94 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 GDPD2Q9HCC8 539 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 TMEM30AQ9NV96 361 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 TBC1D7Q9P0N9 293 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 GCNT4Q9P109 453 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 AGO2Q9UKV8 859 aaKnown RBP11.92□□□□□ -0.5
CSMD1-210ENST00000521646 WASF3Q9UPY6 502 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 DERAQ9Y315 318 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 C2CD2Q9Y426 696 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 WNT6Q9Y6F9 365 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 LOC400499M0QZD8 3231 aa11.92□□□□□ -0.5
CSMD1-210ENST00000521646 NUP205Q92621 2012 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 CACNA1GO43497 2377 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 DSPP15924 2871 aaKnown RBP11.91□□□□□ -0.5
CSMD1-210ENST00000521646 MYMKA6NI61 221 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 KPNA7A9QM74 516 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 SCAMP3O14828 347 aaKnown RBP11.91□□□□□ -0.5
CSMD1-210ENST00000521646 BCKDHBP21953 392 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 CDC25CP30307 473 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 POLR2BP30876 1174 aaKnown RBP11.91□□□□□ -0.5
CSMD1-210ENST00000521646 ABL2P42684 1182 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 TUFMP49411 452 aaKnown RBP11.91□□□□□ -0.5
CSMD1-210ENST00000521646 TAF6P49848 677 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 LIMK1P53667 647 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 USP4Q13107 963 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 PPP2R5DQ14738 602 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 PTPAQ15257 358 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 LMBRD2Q68DH5 695 aaPredicted RBP11.91□□□□□ -0.5
CSMD1-210ENST00000521646 FAM173BQ6P4H8 233 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 DYMQ7RTS9 669 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 ITIH5Q86UX2 942 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 MON1AQ86VX9 555 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 FRMD1Q8N878 549 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 RPLP0P6Q8NHW5 317 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 ZC3H10Q96K80 434 aaKnown RBP11.91□□□□□ -0.5
CSMD1-210ENST00000521646 ST6GALNAC4Q9H4F1 302 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 ZHX3Q9H4I2 956 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 ASB7Q9H672 318 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 TDP1Q9NUW8 608 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 GTF3C4Q9UKN8 822 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 MAGED2Q9UNF1 606 aaPredicted RBP11.91□□□□□ -0.5
CSMD1-210ENST00000521646 CLIC4Q9Y696 253 aa11.91□□□□□ -0.5
CSMD1-210ENST00000521646 MYOFQ9NZM1 2061 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 GOLGA8IPA6NC78 632 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 GOLGA8JA6NMD2 632 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 PATE3B3GLJ2 98 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 MEN1O00255 615 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 NOL4O94818 638 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 ITGB3P05106 788 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 SPINK2P20155 84 aa11.9□□□□□ -0.5
CSMD1-210ENST00000521646 LMO2P25791 158 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms