RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 CHADO15335 359 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 HCRTO43612 131 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 ZNF18P17022 549 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 BDNFP23560 247 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 GABRR2P28476 465 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 STX17P56962 302 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 TEAD2Q15562 447 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 TCP11X2Q5H9J9 407 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 PARM1Q6UWI2 310 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 ACOT1Q86TX2 421 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 FAM200AQ8TCP9 573 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 TWNKQ96RR1 684 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 SMOQ99835 787 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 ZNF638Q14966 1978 aaKnown RBP10.03□□□□□ -0.8
CLK4-209ENST00000521621 USP17L7P0C7H9 530 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 FAM200BP0CF97 657 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 SETSIPP0DME0 302 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 MYL4P12829 197 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 NPR3P17342 541 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 GRIK1P39086 918 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 CLCN5P51795 746 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 CYP27A1Q02318 531 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 USP4Q13107 963 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 CNGA2Q16280 664 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 ARHGAP29Q52LW3 1261 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 LCLAT1Q6UWP7 414 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 MAMSTRQ6ZN01 415 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 CCDC186Q7Z3E2 898 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 DDX42Q86XP3 938 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLK4-209ENST00000521621 CMTM8Q8IZV2 173 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 ZMIZ2Q8NF64 920 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 STK32AQ8WU08 396 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 MRPS31Q92665 395 aaKnown RBP10.03□□□□□ -0.8
CLK4-209ENST00000521621 FGF14Q92915 247 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 CYFIP2Q96F07 1278 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 CDK5RAP1Q96SZ6 601 aaKnown RBP10.03□□□□□ -0.8
CLK4-209ENST00000521621 NDST4Q9H3R1 872 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 TMEM51Q9NW97 253 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 TMEM63CQ9P1W3 806 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 HMGXB4Q9UGU5 601 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 ARHGAP26Q9UNA1 814 aa10.03□□□□□ -0.8
CLK4-209ENST00000521621 COL6A3P12111 3177 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 KCNJ18B7U540 433 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 OAS1P00973 400 aaKnown RBP10.02□□□□□ -0.81
CLK4-209ENST00000521621 PSMC3P17980 439 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 MFAP3P55082 362 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 MYL5Q02045 173 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 KCNJ12Q14500 433 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 DDR2Q16832 855 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 TRIM65Q6PJ69 517 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 CLEC20AQ6ZU45 233 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 BEND5Q7L4P6 421 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 ARHGAP18Q8N392 663 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 ZSCAN18Q8TBC5 510 aaPredicted RBP10.02□□□□□ -0.81
CLK4-209ENST00000521621 SHDQ96IW2 340 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 TUBGCP2Q9BSJ2 902 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 APEX2Q9UBZ4 518 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 A0A1W2PRU2 124 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 ZNF840PA6NDX5 716 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 XPO1O14980 1071 aaKnown RBP10.02□□□□□ -0.81
CLK4-209ENST00000521621 YWHAQP27348 245 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 PLA2G4AP47712 749 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 TPD52L1Q16890 204 aaPredicted RBP10.02□□□□□ -0.81
CLK4-209ENST00000521621 GPR158Q5T848 1215 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 PM20D1Q6GTS8 502 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 SLC2A14Q8TDB8 520 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 SLITRK1Q96PX8 696 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 NELL2Q99435 816 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 SLC46A2Q9BY10 475 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 IRX2Q9BZI1 471 aaPredicted RBP10.02□□□□□ -0.81
CLK4-209ENST00000521621 ATXN3LQ9H3M9 355 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 SIX2Q9NPC8 291 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 TMEM30AQ9NV96 361 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 CLIC5Q9NZA1 410 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 TRPM5Q9NZQ8 1165 aa10.02□□□□□ -0.81
CLK4-209ENST00000521621 SPTBN5Q9NRC6 3674 aaKnown RBP10.01□□□□□ -0.81
CLK4-209ENST00000521621 TRAV19A0A0A6YYK7 116 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 F8VP50 259 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 NRG2O14511 850 aaPredicted RBP10.01□□□□□ -0.81
CLK4-209ENST00000521621 AP1G2O75843 785 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 SOAT2O75908 522 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 PON1P27169 355 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 GPR15P49685 360 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 BCAT1P54687 386 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 TYRO3Q06418 890 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 NCAPHQ15003 741 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 TAF12Q16514 161 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 SGO2Q562F6 1265 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 VITQ6UXI7 678 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 SCARA5Q6ZMJ2 495 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 GIPC2Q8TF65 315 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 IRGQQ8WZA9 623 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 SHC3Q92529 594 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 IRF7Q92985 503 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 ZSWIM3Q96MP5 696 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 NAA15Q9BXJ9 866 aaKnown RBP10.01□□□□□ -0.81
CLK4-209ENST00000521621 C8orf33Q9H7E9 229 aaPredicted RBP10.01□□□□□ -0.81
CLK4-209ENST00000521621 KRT82Q9NSB4 513 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 NFE2L3Q9Y4A8 694 aa10.01□□□□□ -0.81
CLK4-209ENST00000521621 SMTNL1A8MU46 457 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms