RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 TTC39CQ8N584 583 aa21.91■■□□□ 1.1
TRIM35-203ENST00000521253 TMEM105Q8N8V8 129 aa21.91■■□□□ 1.1
TRIM35-203ENST00000521253 TBC1D17Q9HA65 648 aa21.91■■□□□ 1.1
TRIM35-203ENST00000521253 TRPC7Q9HCX4 862 aa21.91■■□□□ 1.1
TRIM35-203ENST00000521253 OBP2AQ9NY56 170 aa21.91■■□□□ 1.1
TRIM35-203ENST00000521253 EHD2Q9NZN4 543 aa21.91■■□□□ 1.1
TRIM35-203ENST00000521253 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.91■■□□□ 1.1
TRIM35-203ENST00000521253 ADORA2BP29275 332 aa21.9■■□□□ 1.1
TRIM35-203ENST00000521253 CLCN5P51795 746 aa21.9■■□□□ 1.1
TRIM35-203ENST00000521253 FCHO2Q0JRZ9 810 aa21.9■■□□□ 1.1
TRIM35-203ENST00000521253 KCNH2Q12809 1159 aa21.9■■□□□ 1.1
TRIM35-203ENST00000521253 IFRD2Q12894 506 aaPredicted RBP21.9■■□□□ 1.1
TRIM35-203ENST00000521253 MLF2Q15773 248 aaPredicted RBP21.9■■□□□ 1.1
TRIM35-203ENST00000521253 NUP93Q8N1F7 819 aa21.9■■□□□ 1.1
TRIM35-203ENST00000521253 ZMIZ2Q8NF64 920 aa21.9■■□□□ 1.1
TRIM35-203ENST00000521253 DNASE1L2Q92874 299 aa21.9■■□□□ 1.1
TRIM35-203ENST00000521253 IRF7Q92985 503 aa21.9■■□□□ 1.1
TRIM35-203ENST00000521253 CYFIP2Q96F07 1278 aa21.9■■□□□ 1.1
TRIM35-203ENST00000521253 HNRNPABQ99729 332 aaKnown RBP21.9■■□□□ 1.1
TRIM35-203ENST00000521253 SMOQ99835 787 aa21.9■■□□□ 1.1
TRIM35-203ENST00000521253 CCL26Q9Y258 94 aa21.9■■□□□ 1.1
TRIM35-203ENST00000521253 MUC6Q6W4X9 2439 aa21.9■■□□□ 1.1
TRIM35-203ENST00000521253 STK25O00506 426 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 TNFRSF10BO14763 440 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 ZNF263O14978 683 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 P4HA2O15460 535 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 PI15O43692 258 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 BEST1O76090 585 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 AFPP02771 609 aaKnown RBP21.89■■□□□ 1.09
TRIM35-203ENST00000521253 FAM200BP0CF97 657 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 AOC1P19801 751 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 RFX1P22670 979 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 CETN1Q12798 172 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 TAF10Q12962 218 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 PHLDB3Q6NSJ2 640 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 IRF2BP1Q8IU81 584 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 YAF2Q8IY57 180 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 CELF5Q8N6W0 485 aaKnown RBP21.89■■□□□ 1.09
TRIM35-203ENST00000521253 SLC4A11Q8NBS3 891 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 USP13Q92995 863 aaPredicted RBP21.89■■□□□ 1.09
TRIM35-203ENST00000521253 CNOT6LQ96LI5 555 aaKnown RBP21.89■■□□□ 1.09
TRIM35-203ENST00000521253 SLC22A12Q96S37 553 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 DNAI2Q9GZS0 605 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 FAM124BQ9H5Z6 455 aaPredicted RBP21.89■■□□□ 1.09
TRIM35-203ENST00000521253 CSNK1G1Q9HCP0 422 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 HEBP1Q9NRV9 189 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 TRPM5Q9NZQ8 1165 aa21.89■■□□□ 1.09
TRIM35-203ENST00000521253 C2orf78A6NCI8 922 aa21.88■■□□□ 1.09
TRIM35-203ENST00000521253 ARNTLO00327 626 aa21.88■■□□□ 1.09
TRIM35-203ENST00000521253 SLC5A3P53794 718 aa21.88■■□□□ 1.09
TRIM35-203ENST00000521253 RAD23BP54727 409 aa21.88■■□□□ 1.09
TRIM35-203ENST00000521253 MAP3K7CLP57077 242 aa21.88■■□□□ 1.09
TRIM35-203ENST00000521253 STARD6P59095 220 aa21.88■■□□□ 1.09
TRIM35-203ENST00000521253 PRKCQQ04759 706 aa21.88■■□□□ 1.09
TRIM35-203ENST00000521253 SCAMP5Q8TAC9 235 aa21.88■■□□□ 1.09
TRIM35-203ENST00000521253 LMO3Q8TAP4 145 aa21.88■■□□□ 1.09
TRIM35-203ENST00000521253 BPIFB1Q8TDL5 484 aa21.88■■□□□ 1.09
TRIM35-203ENST00000521253 TMEM176AQ96HP8 235 aa21.88■■□□□ 1.09
TRIM35-203ENST00000521253 SHDQ96IW2 340 aa21.88■■□□□ 1.09
TRIM35-203ENST00000521253 HEXIM2Q96MH2 286 aaKnown RBP21.88■■□□□ 1.09
TRIM35-203ENST00000521253 CYP2S1Q96SQ9 504 aa21.88■■□□□ 1.09
TRIM35-203ENST00000521253 TDP1Q9NUW8 608 aa21.88■■□□□ 1.09
TRIM35-203ENST00000521253 TRAV19A0A0A6YYK7 116 aa21.87■■□□□ 1.09
TRIM35-203ENST00000521253 ZNF840PA6NDX5 716 aa21.87■■□□□ 1.09
TRIM35-203ENST00000521253 CHADO15335 359 aa21.87■■□□□ 1.09
TRIM35-203ENST00000521253 RTN3O95197 1032 aaPredicted RBP21.87■■□□□ 1.09
TRIM35-203ENST00000521253 TBXAS1P24557 533 aaPredicted RBP21.87■■□□□ 1.09
TRIM35-203ENST00000521253 YWHAQP27348 245 aa21.87■■□□□ 1.09
TRIM35-203ENST00000521253 ERCC5P28715 1186 aaPredicted RBP21.87■■□□□ 1.09
TRIM35-203ENST00000521253 PPP1R26Q5T8A7 1209 aaPredicted RBP21.87■■□□□ 1.09
TRIM35-203ENST00000521253 RBM43Q6ZSC3 357 aaKnown RBP21.87■■□□□ 1.09
TRIM35-203ENST00000521253 CLEC20AQ6ZU45 233 aa21.87■■□□□ 1.09
TRIM35-203ENST00000521253 CREBRFQ8IUR6 639 aa21.87■■□□□ 1.09
TRIM35-203ENST00000521253 ARL14EPQ8N8R7 260 aaPredicted RBP21.87■■□□□ 1.09
TRIM35-203ENST00000521253 ZFYVE19Q96K21 471 aa21.87■■□□□ 1.09
TRIM35-203ENST00000521253 NT5C1BQ96P26 610 aa21.87■■□□□ 1.09
TRIM35-203ENST00000521253 SLITRK1Q96PX8 696 aa21.87■■□□□ 1.09
TRIM35-203ENST00000521253 DDX23Q9BUQ8 820 aaKnown RBP21.87■■□□□ 1.09
TRIM35-203ENST00000521253 FOXQ1Q9C009 403 aa21.87■■□□□ 1.09
TRIM35-203ENST00000521253 TRPV5Q9NQA5 729 aa21.87■■□□□ 1.09
TRIM35-203ENST00000521253 IL37Q9NZH6 218 aa21.87■■□□□ 1.09
TRIM35-203ENST00000521253 GCNT4Q9P109 453 aa21.87■■□□□ 1.09
TRIM35-203ENST00000521253 DACH1Q9UI36 760 aa21.87■■□□□ 1.09
TRIM35-203ENST00000521253 COL4A3Q01955 1670 aa21.86■■□□□ 1.09
TRIM35-203ENST00000521253 CKMP06732 381 aa21.86■■□□□ 1.09
TRIM35-203ENST00000521253 PPP3CCP48454 512 aa21.86■■□□□ 1.09
TRIM35-203ENST00000521253 YWHAEP62258 255 aaKnown RBP21.86■■□□□ 1.09
TRIM35-203ENST00000521253 ZNF268Q14587 947 aaPredicted RBP21.86■■□□□ 1.09
TRIM35-203ENST00000521253 TPD52L1Q16890 204 aaPredicted RBP21.86■■□□□ 1.09
TRIM35-203ENST00000521253 TPRG1Q6ZUI0 275 aa21.86■■□□□ 1.09
TRIM35-203ENST00000521253 UBR7Q8N806 425 aa21.86■■□□□ 1.09
TRIM35-203ENST00000521253 EHBP1Q8NDI1 1231 aa21.86■■□□□ 1.09
TRIM35-203ENST00000521253 RIN3Q8TB24 985 aa21.86■■□□□ 1.09
TRIM35-203ENST00000521253 FBXO32Q969P5 355 aa21.86■■□□□ 1.09
TRIM35-203ENST00000521253 KIF9Q9HAQ2 790 aa21.86■■□□□ 1.09
TRIM35-203ENST00000521253 GREB1Q4ZG55 1949 aa21.86■■□□□ 1.09
TRIM35-203ENST00000521253 NUP210Q8TEM1 1887 aaPredicted RBP21.86■■□□□ 1.09
TRIM35-203ENST00000521253 MBD3O95983 291 aa21.85■■□□□ 1.09
TRIM35-203ENST00000521253 ABL1P00519 1130 aa21.85■■□□□ 1.09
TRIM35-203ENST00000521253 USP17L7P0C7H9 530 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms