RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 ATXN3P54252 364 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 LIN52Q52LA3 116 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 CIAPIN1Q6FI81 312 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 ADGRD1Q6QNK2 874 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 CEP70Q8NHQ1 597 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 PTCD3Q96EY7 689 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 TIPINQ9BVW5 301 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 EBF3Q9H4W6 596 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 APOBEC2Q9Y235 224 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 hCG_1818297A0A087WSY0 165 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 CDC16Q13042 620 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 STX3Q13277 289 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 CTC1Q2NKJ3 1217 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 SWSAP1Q6NVH7 229 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 MAP4K3Q8IVH8 894 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 SP8Q8IXZ3 490 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 FAM81AQ8TBF8 368 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 AGR3Q8TD06 166 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 PHACTR1Q9C0D0 580 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 ZC3H7BQ9UGR2 993 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 PACSIN3Q9UKS6 424 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 ATRNL1Q5VV63 1379 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 TCRBV9S1A1TA0A576 114 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 PIK3R2O00459 728 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 MAPTP10636 758 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 NLRP11P59045 1033 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 TCHHL1Q5QJ38 904 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 TREML1Q86YW5 311 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 RELL1Q8IUW5 271 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 UNC45BQ8IWX7 931 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 TTC13Q8NBP0 860 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 ZBTB45Q96K62 511 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 DDX56Q9NY93 547 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 SLC7A8Q9UHI5 535 aa13.38□□□□□ -0.27
TRAPPC9-208ENST00000520857 A6NJR5 290 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 SNRPAP09012 282 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 C6orf222P0C671 652 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 KRT3P12035 628 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 GYS1P13807 737 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 HIRAP54198 1017 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 OSTNP61366 133 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 PSMC1P62191 440 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 TFAMQ00059 246 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 TMED1Q13445 227 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 NCOA4Q13772 614 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 WDR78Q5VTH9 848 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 FOXB2Q5VYV0 432 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 MARK2Q7KZI7 788 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 LRRN4Q8WUT4 740 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 ZFAND2BQ8WV99 257 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 RMDN3Q96TC7 470 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 UBE2OQ9C0C9 1292 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 POLR3FQ9H1D9 316 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 TLE6Q9H808 572 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 TBC1D22BQ9NU19 505 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 COQ4Q9Y3A0 265 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 K7ERI5 159 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 TMEM63AO94886 807 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 DLDP09622 509 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 SLC18A1P54219 525 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 GSTA3Q16772 222 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 TDRD10Q5VZ19 366 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 PPP4R1Q8TF05 950 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 BSNDQ8WZ55 320 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 TMEM143Q96AN5 459 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 ZDHHC15Q96MV8 337 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 NR1H4Q96RI1 486 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 DDX18Q9NVP1 670 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 PHLPP1O60346 1717 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 C10orf71Q711Q0 1435 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 E5RJQ4 531 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 ROR1Q01973 937 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 C1QBPQ07021 282 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 PTP4A2Q12974 167 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 EFHC1Q5JVL4 640 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 CC2D2BQ6DHV5 1058 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 PLEKHA7Q6IQ23 1121 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 ICA1LQ8NDH6 482 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 OR6Y1Q8NGX8 325 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 MPP4Q96JB8 637 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 STRA6Q9BX79 667 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 MMADHCQ9H3L0 296 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 NHSL1Q5SYE7 1610 aa13.37□□□□□ -0.27
TRAPPC9-208ENST00000520857 KRT38O76015 456 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 POLR2BP30876 1174 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 ORC1Q13415 861 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 PIGHQ14442 188 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 KRT81Q14533 505 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 RAPH1Q70E73 1250 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 RAB3IL1Q8TBN0 382 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 SKA1Q96BD8 255 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 PANX3Q96QZ0 392 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 TAAR1Q96RJ0 339 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 TARS2Q9BW92 718 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 SPATA16Q9BXB7 569 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 TXNDC16Q9P2K2 825 aa13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 SCAF8Q9UPN6 1271 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 DRG1Q9Y295 367 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 ASTN2O75129 1339 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC9-208ENST00000520857 CFLARO15519 480 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms