RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 IL17RBQ9NRM6 502 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 KLC4Q9NSK0 619 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 VSX1Q9NZR4 365 aaPredicted RBP4.88□□□□□ -1.63
SQLE-204ENST00000520493 PNMA2Q9UL42 364 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 SNX13Q9Y5W8 968 aa4.88□□□□□ -1.63
SQLE-204ENST00000520493 COL11A2P13942 1736 aaPredicted RBP4.87□□□□□ -1.63
SQLE-204ENST00000520493 INO80B-WBP1J3KQ70 363 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 MATN4O95460 622 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 TTLL1O95922 423 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 CD53P19397 219 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 WT1P19544 449 aaPredicted RBP4.87□□□□□ -1.63
SQLE-204ENST00000520493 SLC7A1P30825 629 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 STT3AP46977 705 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 TNFAIP2Q03169 654 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 PLAC9Q5JTB6 97 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 FAM209BQ5JX69 171 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 TEDDM1Q5T9Z0 273 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 TMPRSS9Q7Z410 1059 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 SMAP1Q8IYB5 467 aaPredicted RBP4.87□□□□□ -1.63
SQLE-204ENST00000520493 PSD4Q8NDX1 1056 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 SARAFQ96BY9 339 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 NT5C1BQ96P26 610 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 HAPLN3Q96S86 360 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 EIF2AQ9BY44 585 aaKnown RBP4.87□□□□□ -1.63
SQLE-204ENST00000520493 TRIM54Q9BYV2 358 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 INO80BQ9C086 356 aaPredicted RBP4.87□□□□□ -1.63
SQLE-204ENST00000520493 TINAGL1Q9GZM7 467 aaPredicted RBP4.87□□□□□ -1.63
SQLE-204ENST00000520493 ZNF69Q9UC07 566 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 AFF4Q9UHB7 1163 aaKnown RBP4.87□□□□□ -1.63
SQLE-204ENST00000520493 MED16Q9Y2X0 877 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 RAD54BQ9Y620 910 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 WNT6Q9Y6F9 365 aa4.87□□□□□ -1.63
SQLE-204ENST00000520493 ARHGEF17Q96PE2 2063 aaPredicted RBP4.87□□□□□ -1.63
SQLE-204ENST00000520493 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 hCG_1642624A0A1W2PR95 340 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 ADM5C9JUS6 153 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 PROB1E7EW31 1015 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 NPHP1O15259 732 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 BRAFP15056 766 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 NPR1P16066 1061 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 TSHRP16473 764 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 CD6P30203 668 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 PPM1AP35813 382 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 PHKA1P46020 1223 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 TRAPPC10P48553 1259 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 ANO1Q5XXA6 986 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 PTF1AQ7RTS3 328 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 NKAPQ8N5F7 415 aaKnown RBP4.86□□□□□ -1.63
SQLE-204ENST00000520493 RNF152Q8N8N0 203 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 ANKRD42Q8N9B4 389 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 POF1BQ8WVV4 589 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 TMEM41AQ96HV5 264 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 LRIG1Q96JA1 1093 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 PBKQ96KB5 322 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 SENP7Q9BQF6 1050 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 C1orf43Q9BWL3 253 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 BRIP1Q9BX63 1249 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 ACTRT3Q9BYD9 372 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 CERS4Q9HA82 394 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.86□□□□□ -1.63
SQLE-204ENST00000520493 ETAA1Q9NY74 926 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.86□□□□□ -1.63
SQLE-204ENST00000520493 ARPP21Q9UBL0 812 aaPredicted RBP4.86□□□□□ -1.63
SQLE-204ENST00000520493 PCDHA1Q9Y5I3 950 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 USP19O94966 1318 aa4.86□□□□□ -1.63
SQLE-204ENST00000520493 POM121BA6NF01 834 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 LRRC3CA6NJW4 275 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 LINC00473A8K010 186 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 M0QYG6 137 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 ADAMTS3O15072 1205 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 KPNA5O15131 536 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 VPS4BO75351 444 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 C1QL1O75973 258 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 NXPH3O95157 252 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 KIF20AO95235 890 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 ONECUT2O95948 504 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 PARP1P09874 1014 aaKnown RBP4.85□□□□□ -1.63
SQLE-204ENST00000520493 KITP10721 976 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 HALP42357 657 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 CCT5P48643 541 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 SUMO3P55854 103 aaPredicted RBP4.85□□□□□ -1.63
SQLE-204ENST00000520493 COLEC12Q5KU26 742 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 RBM20Q5T481 1227 aaKnown RBP4.85□□□□□ -1.63
SQLE-204ENST00000520493 TAF2Q6P1X5 1199 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 PGBD2Q6P3X8 592 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 CLEC4GQ6UXB4 293 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 SESTD1Q86VW0 696 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 PPP1R3BQ86XI6 285 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 COL23A1Q86Y22 540 aaPredicted RBP4.85□□□□□ -1.63
SQLE-204ENST00000520493 CPXCR1Q8N123 301 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 SDR16C5Q8N3Y7 309 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 SH2D3CQ8N5H7 860 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 ATP11CQ8NB49 1132 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 SPATA5Q8NB90 893 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 VPS37AQ8NEZ2 397 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 OR6B3Q8NGW1 331 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 FKBP10Q96AY3 582 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 FAM136AQ96C01 138 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 ISCA1Q9BUE6 129 aa4.85□□□□□ -1.63
SQLE-204ENST00000520493 EHD3Q9NZN3 535 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms