RNA–Protein interactions for RNA: ENST00000520480.5

R3HCC1-206, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 3

Gene R3HCC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-206ENST00000520480 ZC3H3Q8IXZ2 948 aaKnown RBP15.28■□□□□ 0.04
R3HCC1-206ENST00000520480 USP13Q92995 863 aaPredicted RBP15.28■□□□□ 0.04
R3HCC1-206ENST00000520480 CLDN23Q96B33 292 aa15.28■□□□□ 0.04
R3HCC1-206ENST00000520480 MED10Q9BTT4 135 aa15.28■□□□□ 0.04
R3HCC1-206ENST00000520480 TTLL2Q9BWV7 592 aa15.28■□□□□ 0.04
R3HCC1-206ENST00000520480 DNAI2Q9GZS0 605 aa15.28■□□□□ 0.04
R3HCC1-206ENST00000520480 NIF3L1Q9GZT8 377 aa15.28■□□□□ 0.04
R3HCC1-206ENST00000520480 C8orf33Q9H7E9 229 aaPredicted RBP15.28■□□□□ 0.04
R3HCC1-206ENST00000520480 CYP3A43Q9HB55 503 aa15.28■□□□□ 0.04
R3HCC1-206ENST00000520480 TRPC7Q9HCX4 862 aa15.28■□□□□ 0.04
R3HCC1-206ENST00000520480 FAM86C1Q9NVL1 165 aa15.28■□□□□ 0.04
R3HCC1-206ENST00000520480 TRPM5Q9NZQ8 1165 aa15.28■□□□□ 0.04
R3HCC1-206ENST00000520480 MAN1B1Q9UKM7 699 aa15.28■□□□□ 0.04
R3HCC1-206ENST00000520480 CACNA1IQ9P0X4 2223 aa15.28■□□□□ 0.04
R3HCC1-206ENST00000520480 RIF1Q5UIP0 2472 aaKnown RBP15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 ANAPC1Q9H1A4 1944 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 CLDN5O00501 218 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 LRRN2O75325 713 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 CKMP06732 381 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 PFKLP17858 780 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 CCNE1P24864 410 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 RPS9P46781 194 aaKnown RBP15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 MRE11P49959 708 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 NDST1P52848 882 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 USP46P62068 366 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 INCA1Q0VD86 236 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 ACOT1Q86TX2 421 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 FAM35AQ86V20 835 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 ALYREFQ86V81 257 aaKnown RBP15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 C1orf210Q8IVY1 113 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 CRYBG2Q8N1P7 616 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 FAM3CQ92520 227 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 SMARCD1Q96GM5 515 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 ZFYVE19Q96K21 471 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 CCL26Q9Y258 94 aa15.27■□□□□ 0.04
R3HCC1-206ENST00000520480 KIF26AQ9ULI4 1882 aaPredicted RBP15.27■□□□□ 0.03
R3HCC1-206ENST00000520480 SHISA7A6NL88 538 aa15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 RTN3O95197 1032 aaPredicted RBP15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 PMS1P54277 932 aaKnown RBP15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 CACNA2D1P54289 1103 aa15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 UBE2HP62256 183 aa15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 DCAF17Q5H9S7 520 aaPredicted RBP15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 TCERG1LQ5VWI1 586 aa15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 ISM2Q6H9L7 571 aa15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 CC2D1AQ6P1N0 951 aaPredicted RBP15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 RALGPS2Q86X27 583 aaPredicted RBP15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 FUKQ8N0W3 1084 aa15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 NUP93Q8N1F7 819 aa15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 TTC39CQ8N584 583 aa15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 FBXL13Q8NEE6 735 aa15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 FAXDC2Q96IV6 333 aa15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 SLITRK1Q96PX8 696 aa15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 PHOX2BQ99453 314 aa15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 APOBEC3GQ9HC16 384 aaKnown RBP15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 DMAP1Q9NPF5 467 aaPredicted RBP15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 TMEM30AQ9NV96 361 aa15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 SPATA6Q9NWH7 488 aaPredicted RBP15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 GTSE1Q9NYZ3 720 aa15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 HMGXB4Q9UGU5 601 aa15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 ARMCX3Q9UH62 379 aaPredicted RBP15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 NDRG2Q9UN36 371 aaKnown RBP15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 ZNF292O60281 2723 aa15.26■□□□□ 0.03
R3HCC1-206ENST00000520480 PATJQ8NI35 1801 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 TRIM49BA6NDI0 452 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 ZNF840PA6NDX5 716 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 PROB1E7EW31 1015 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 HDCP19113 662 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 NBL1P41271 181 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 TAF10Q12962 218 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 ORC1Q13415 861 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 MORC3Q14149 939 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 PDGFRLQ15198 375 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 ITPRIPL2Q3MIP1 535 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 WDR44Q5JSH3 913 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 FOXR2Q6PJQ5 311 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 PAQR9Q6ZVX9 377 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 ZNF687Q8N1G0 1237 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 ARL14EPQ8N8R7 260 aaPredicted RBP15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 PDZD8Q8NEN9 1154 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 SLC2A14Q8TDB8 520 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 CEP63Q96MT8 703 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 SLC22A12Q96S37 553 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 CYP2S1Q96SQ9 504 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 KCNK16Q96T55 309 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 FAM83CQ9BQN1 747 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 IER2Q9BTL4 223 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 NT5C1AQ9BXI3 368 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 METTL14Q9HCE5 456 aaKnown RBP15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 GKN1Q9NS71 199 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 KRT82Q9NSB4 513 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 RAB20Q9NX57 234 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 GCNT4Q9P109 453 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 MYH10P35580 1976 aa15.25■□□□□ 0.03
R3HCC1-206ENST00000520480 HELZP42694 1942 aaKnown RBP15.24■□□□□ 0.03
R3HCC1-206ENST00000520480 BICDL2A1A5D9 508 aa15.24■□□□□ 0.03
R3HCC1-206ENST00000520480 C2orf78A6NCI8 922 aa15.24■□□□□ 0.03
R3HCC1-206ENST00000520480 SPECC1L-ADORA2AF8WAN1 911 aa15.24■□□□□ 0.03
R3HCC1-206ENST00000520480 LAMTOR5O43504 91 aa15.24■□□□□ 0.03
R3HCC1-206ENST00000520480 AP1G2O75843 785 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms