RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 TRPC3Q13507 836 aa16.19■□□□□ 0.18
CSMD1-207ENST00000520451 CSRP2Q16527 193 aa16.19■□□□□ 0.18
CSMD1-207ENST00000520451 EML3Q32P44 896 aa16.19■□□□□ 0.18
CSMD1-207ENST00000520451 WDR72Q3MJ13 1102 aa16.19■□□□□ 0.18
CSMD1-207ENST00000520451 HSCBQ8IWL3 235 aa16.19■□□□□ 0.18
CSMD1-207ENST00000520451 RTKNQ9BST9 563 aa16.19■□□□□ 0.18
CSMD1-207ENST00000520451 POLR3BQ9NW08 1133 aaPredicted RBP16.19■□□□□ 0.18
CSMD1-207ENST00000520451 TRPM5Q9NZQ8 1165 aa16.19■□□□□ 0.18
CSMD1-207ENST00000520451 PCDHA7Q9UN72 937 aa16.19■□□□□ 0.18
CSMD1-207ENST00000520451 ARHGAP26Q9UNA1 814 aa16.19■□□□□ 0.18
CSMD1-207ENST00000520451 NME7Q9Y5B8 376 aa16.19■□□□□ 0.18
CSMD1-207ENST00000520451 SPTBN2O15020 2390 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.18■□□□□ 0.18
CSMD1-207ENST00000520451 DCDC2BA2VCK2 349 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 F8VP50 259 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 RPP40O75818 363 aaKnown RBP16.18■□□□□ 0.18
CSMD1-207ENST00000520451 MYL6P60660 151 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 NR1H3Q13133 447 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 CUL4BQ13620 913 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 BMT2Q1RMZ1 405 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 FBXO43Q4G163 708 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 RESP18Q5W5W9 173 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 PRR23CQ6ZRP0 262 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 GRAMD1CQ8IYS0 662 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 NETO1Q8TDF5 533 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 GAB3Q8WWW8 586 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 ZNF516Q92618 1163 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 CD101Q93033 1021 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 HHIPQ96QV1 700 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 TTLL2Q9BWV7 592 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 DPEP3Q9H4B8 488 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 EHD2Q9NZN4 543 aa16.18■□□□□ 0.18
CSMD1-207ENST00000520451 CGNQ9P2M7 1197 aaKnown RBP16.18■□□□□ 0.18
CSMD1-207ENST00000520451 NXF1Q9UBU9 619 aaKnown RBP16.18■□□□□ 0.18
CSMD1-207ENST00000520451 CCDC163A0A0D9SF12 145 aa16.17■□□□□ 0.18
CSMD1-207ENST00000520451 PVALEFA0A1B0GWK0 134 aa16.17■□□□□ 0.18
CSMD1-207ENST00000520451 EXOC3O60645 756 aa16.17■□□□□ 0.18
CSMD1-207ENST00000520451 PHACTR2O75167 634 aa16.17■□□□□ 0.18
CSMD1-207ENST00000520451 CLSTN1O94985 981 aa16.17■□□□□ 0.18
CSMD1-207ENST00000520451 FAM163BP0C2L3 166 aa16.17■□□□□ 0.18
CSMD1-207ENST00000520451 CCDC192P0DO97 292 aa16.17■□□□□ 0.18
CSMD1-207ENST00000520451 PDIA4P13667 645 aaKnown RBP16.17■□□□□ 0.18
CSMD1-207ENST00000520451 TCF3P15923 654 aa16.17■□□□□ 0.18
CSMD1-207ENST00000520451 PFKLP17858 780 aa16.17■□□□□ 0.18
CSMD1-207ENST00000520451 PTPN1P18031 435 aaKnown RBP16.17■□□□□ 0.18
CSMD1-207ENST00000520451 KNOP1Q1ED39 458 aaKnown RBP16.17■□□□□ 0.18
CSMD1-207ENST00000520451 CACNA2D4Q7Z3S7 1137 aa16.17■□□□□ 0.18
CSMD1-207ENST00000520451 C12orf56Q8IXR9 622 aa16.17■□□□□ 0.18
CSMD1-207ENST00000520451 RPLP0P6Q8NHW5 317 aa16.17■□□□□ 0.18
CSMD1-207ENST00000520451 C8orf48Q96LL4 319 aa16.17■□□□□ 0.18
CSMD1-207ENST00000520451 GZF1Q9H116 711 aaPredicted RBP16.17■□□□□ 0.18
CSMD1-207ENST00000520451 LINC00597Q9H2U6 94 aa16.17■□□□□ 0.18
CSMD1-207ENST00000520451 ZNF840PA6NDX5 716 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 A8MXQ7 604 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 LEFTY2O00292 366 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 AXIN1O15169 862 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 NFATC1O95644 943 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 STAU1O95793 577 aaKnown RBP16.16■□□□□ 0.18
CSMD1-207ENST00000520451 ABL1P00519 1130 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 ATICP31939 592 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 CASP4P49662 377 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 CACNA2D1P54289 1103 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 NOP14P78316 857 aaKnown RBP16.16■□□□□ 0.18
CSMD1-207ENST00000520451 ZXDBP98169 803 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 IFRD2Q12894 506 aaPredicted RBP16.16■□□□□ 0.18
CSMD1-207ENST00000520451 PSMD2Q13200 908 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 BIRC3Q13489 604 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 KBTBD6Q86V97 674 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 CEP57L1Q8IYX8 460 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 CAMKK1Q8N5S9 505 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 B3GALNT2Q8NCR0 500 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 EZH1Q92800 747 aaPredicted RBP16.16■□□□□ 0.18
CSMD1-207ENST00000520451 SYAP1Q96A49 352 aaPredicted RBP16.16■□□□□ 0.18
CSMD1-207ENST00000520451 ZNF518BQ9C0D4 1074 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 ELOVL4Q9GZR5 314 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 XYLT2Q9H1B5 865 aa16.16■□□□□ 0.18
CSMD1-207ENST00000520451 GREB1Q4ZG55 1949 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 ANAPC1Q9H1A4 1944 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 CLDN5O00501 218 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 SLC30A4O14863 429 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 GDF9O60383 454 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 FOXD2O60548 495 aaPredicted RBP16.15■□□□□ 0.18
CSMD1-207ENST00000520451 PPP3CCP48454 512 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 TAF10Q12962 218 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 TDRD10Q5VZ19 366 aaKnown RBP16.15■□□□□ 0.18
CSMD1-207ENST00000520451 ATL3Q6DD88 541 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 GOLGA5Q8TBA6 731 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 PLEKHO2Q8TD55 490 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 ACDQ96AP0 544 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 LOXL4Q96JB6 756 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 SLITRK1Q96PX8 696 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 B3GNT5Q9BYG0 378 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 ARRDC1-AS1Q9H2J1 176 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 SMYD3Q9H7B4 428 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 EXOC1Q9NV70 894 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 TMEM30AQ9NV96 361 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 SMPD4Q9NXE4 827 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 SERTAD1Q9UHV2 236 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 CFAP45Q9UL16 551 aa16.15■□□□□ 0.18
CSMD1-207ENST00000520451 CPQQ9Y646 472 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms