RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 MAGEC3Q8TD91 643 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 FAM162AQ96A26 154 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 MRPL48Q96GC5 212 aaKnown RBP12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 CCDC28BQ9BUN5 200 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 CCSER2Q9H7U1 834 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 EXOSC4Q9NPD3 245 aaKnown RBP12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 EEF2KO00418 725 aaKnown RBP12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 PRLP01236 227 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 CSE1LP55060 971 aaKnown RBP12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 TMEM63BQ5T3F8 832 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 B3GNT6Q6ZMB0 384 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 DDX53Q86TM3 631 aaKnown RBP12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 ZFRQ96KR1 1074 aaKnown RBP12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 SPON2Q9BUD6 331 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 IRX2Q9BZI1 471 aaPredicted RBP12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 KCNH7Q9NS40 1196 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 TECPR2O15040 1411 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 FAM25AB3EWG3 89 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 FAM25CB3EWG5 89 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 FAM25GB3EWG6 89 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 ATP9AO75110 1047 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 KLHL18O94889 574 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 SMAD1Q15797 465 aaKnown RBP12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 KCTD21Q4G0X4 260 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 FAAH2Q6GMR7 532 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 ZNF544Q6NX49 715 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 RNF135Q8IUD6 432 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 GPRASP2Q96D09 838 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 TMEM39BQ9GZU3 492 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 SPATA7Q9P0W8 599 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 SLIT1O75093 1534 aa12.56□□□□□ -0.4
ERGIC1-208ENST00000520399 TBC1D12O60347 775 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 DLGAP3O95886 979 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 MLNP12872 115 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 PPP3CCP48454 512 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 HIC1Q14526 733 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 C11orf88Q6PI97 169 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 MTERF3Q96E29 417 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 B3GALT6Q96L58 329 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 MBD2Q9UBB5 411 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 TRIM64CA6NLI5 447 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 KLRK1P26718 216 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 ACADSBP45954 432 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 CENPCQ03188 943 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 CCNI2Q6ZMN8 369 aaPredicted RBP12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 GPR141Q7Z602 305 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 OR6P1Q8NGX9 317 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 KCNB2Q92953 911 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 RMDN1Q96DB5 314 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 GGA3Q9NZ52 723 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 SLC37A4O43826 429 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 TRIM13O60858 407 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 ZCCHC18P0CG32 403 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 CACNB2Q08289 660 aaPredicted RBP12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 IER5Q5VY09 327 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 EFCAB12Q6NXP0 572 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 C10orf53Q8N6V4 93 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 BBS2Q9BXC9 721 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 RBM12Q9NTZ6 932 aaKnown RBP12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 SLC38A7Q9NVC3 462 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 DNAAF2Q9NVR5 837 aaKnown RBP12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 DAPK2Q9UIK4 370 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 BAIAP3O94812 1187 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 GMPSP49915 693 aaPredicted RBP12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 NCKAP1LP55160 1127 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 PSMC6P62333 389 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 SNX17Q15036 470 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 GOLGA7BQ2TAP0 167 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 RSBN1Q5VWQ0 802 aaPredicted RBP12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 CLEC4FQ8N1N0 589 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 ATPAF2Q8N5M1 289 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 WWP1Q9H0M0 922 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 PIGUQ9H490 435 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 PPCSQ9HAB8 311 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 TRIM39Q9HCM9 518 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 F8VZ95 297 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 DNALI1O14645 258 aaPredicted RBP12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 MSH4O15457 936 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 DYNC1LI2O43237 492 aaPredicted RBP12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 CYBBP04839 570 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 CHN1P15882 459 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 ITGAXP20702 1163 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 C21orf59P57076 290 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 SCRN3Q0VDG4 424 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 INPP5DQ92835 1189 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 TAAR1Q96RJ0 339 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 PSMC3IPQ9P2W1 217 aaPredicted RBP12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 NEU2Q9Y3R4 380 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 PCDHB2Q9Y5E7 798 aa12.55□□□□□ -0.4
ERGIC1-208ENST00000520399 C3orf70A6NLC5 250 aaPredicted RBP12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 ICAM1P05362 532 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 COMTP21964 271 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 GRB10Q13322 594 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 AGBL3Q8NEM8 1001 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 ATXN7L3BQ96GX2 97 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 RAD18Q9NS91 495 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 MATN2O00339 956 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 GPD1P21695 349 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 SERPINB9P50453 376 aa12.54□□□□□ -0.4
ERGIC1-208ENST00000520399 LONRF1Q17RB8 773 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms