RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 DUS2Q9NX74 493 aaKnown RBP26.99■■□□□ 1.91
VEGFA-220ENST00000519767 ZDHHC9Q9Y397 364 aa26.99■■□□□ 1.91
VEGFA-220ENST00000519767 FAM237AA0A1B0GTK4 181 aa26.98■■□□□ 1.91
VEGFA-220ENST00000519767 RPN1P04843 607 aaKnown RBP26.98■■□□□ 1.91
VEGFA-220ENST00000519767 CASP4P49662 377 aa26.98■■□□□ 1.91
VEGFA-220ENST00000519767 NR1H3Q13133 447 aa26.98■■□□□ 1.91
VEGFA-220ENST00000519767 NCOA4Q13772 614 aa26.98■■□□□ 1.91
VEGFA-220ENST00000519767 ZNF77Q15935 545 aa26.98■■□□□ 1.91
VEGFA-220ENST00000519767 ZNF667Q5HYK9 610 aa26.98■■□□□ 1.91
VEGFA-220ENST00000519767 TDRD10Q5VZ19 366 aaKnown RBP26.98■■□□□ 1.91
VEGFA-220ENST00000519767 Q6ZS52 159 aa26.98■■□□□ 1.91
VEGFA-220ENST00000519767 LONP2Q86WA8 852 aa26.98■■□□□ 1.91
VEGFA-220ENST00000519767 PLEKHO2Q8TD55 490 aa26.98■■□□□ 1.91
VEGFA-220ENST00000519767 TMC2Q8TDI7 906 aa26.98■■□□□ 1.91
VEGFA-220ENST00000519767 ATP2A3Q93084 1043 aa26.98■■□□□ 1.91
VEGFA-220ENST00000519767 ARHGAP26Q9UNA1 814 aa26.98■■□□□ 1.91
VEGFA-220ENST00000519767 CEP250Q9BV73 2442 aa26.98■■□□□ 1.91
VEGFA-220ENST00000519767 C2orf78A6NCI8 922 aa26.97■■□□□ 1.91
VEGFA-220ENST00000519767 OTOL1A6NHN0 477 aaPredicted RBP26.97■■□□□ 1.91
VEGFA-220ENST00000519767 LRRIQ3A6PVS8 624 aaPredicted RBP26.97■■□□□ 1.91
VEGFA-220ENST00000519767 F8VP50 259 aa26.97■■□□□ 1.91
VEGFA-220ENST00000519767 IKBKBO14920 756 aa26.97■■□□□ 1.91
VEGFA-220ENST00000519767 C4BPAP04003 597 aaKnown RBP26.97■■□□□ 1.91
VEGFA-220ENST00000519767 P4HA1P13674 534 aa26.97■■□□□ 1.91
VEGFA-220ENST00000519767 ARSAP15289 507 aa26.97■■□□□ 1.91
VEGFA-220ENST00000519767 SGSM1Q2NKQ1 1148 aa26.97■■□□□ 1.91
VEGFA-220ENST00000519767 ZNF699Q32M78 642 aa26.97■■□□□ 1.91
VEGFA-220ENST00000519767 KIAA1958Q8N8K9 716 aa26.97■■□□□ 1.91
VEGFA-220ENST00000519767 B3GALNT2Q8NCR0 500 aa26.97■■□□□ 1.91
VEGFA-220ENST00000519767 ECT2Q9H8V3 914 aa26.97■■□□□ 1.91
VEGFA-220ENST00000519767 FRMD4BQ9Y2L6 1034 aa26.97■■□□□ 1.91
VEGFA-220ENST00000519767 CACNA1AO00555 2505 aa26.97■■□□□ 1.91
VEGFA-220ENST00000519767 K7ESF4 209 aa26.96■■□□□ 1.91
VEGFA-220ENST00000519767 CALUO43852 315 aaPredicted RBP26.96■■□□□ 1.91
VEGFA-220ENST00000519767 NR3C1P04150 777 aa26.96■■□□□ 1.91
VEGFA-220ENST00000519767 DRD1P21728 446 aa26.96■■□□□ 1.91
VEGFA-220ENST00000519767 IFNAR2P48551 515 aa26.96■■□□□ 1.91
VEGFA-220ENST00000519767 USP46P62068 366 aa26.96■■□□□ 1.91
VEGFA-220ENST00000519767 RIN3Q8TB24 985 aa26.96■■□□□ 1.91
VEGFA-220ENST00000519767 SH3RF2Q8TEC5 729 aa26.96■■□□□ 1.91
VEGFA-220ENST00000519767 TAF4BQ92750 862 aa26.96■■□□□ 1.91
VEGFA-220ENST00000519767 TNIP3Q96KP6 325 aa26.96■■□□□ 1.91
VEGFA-220ENST00000519767 B3GNT5Q9BYG0 378 aa26.96■■□□□ 1.91
VEGFA-220ENST00000519767 GMEB2Q9UKD1 530 aa26.96■■□□□ 1.91
VEGFA-220ENST00000519767 NME7Q9Y5B8 376 aa26.96■■□□□ 1.91
VEGFA-220ENST00000519767 DENND4CQ5VZ89 1909 aa26.95■■□□□ 1.9
VEGFA-220ENST00000519767 A0A1W2PQ27 194 aa26.95■■□□□ 1.9
VEGFA-220ENST00000519767 A0A1W2PQ64 194 aa26.95■■□□□ 1.9
VEGFA-220ENST00000519767 A0A1W2PQD8 194 aa26.95■■□□□ 1.9
VEGFA-220ENST00000519767 ZNF840PA6NDX5 716 aa26.95■■□□□ 1.9
VEGFA-220ENST00000519767 GALK1P51570 392 aa26.95■■□□□ 1.9
VEGFA-220ENST00000519767 NDUFA8P51970 172 aa26.95■■□□□ 1.9
VEGFA-220ENST00000519767 USP4Q13107 963 aa26.95■■□□□ 1.9
VEGFA-220ENST00000519767 FBXO43Q4G163 708 aa26.95■■□□□ 1.9
VEGFA-220ENST00000519767 LAIR1Q6GTX8 287 aa26.95■■□□□ 1.9
VEGFA-220ENST00000519767 FSTL4Q6MZW2 842 aa26.95■■□□□ 1.9
VEGFA-220ENST00000519767 SLITRK1Q96PX8 696 aa26.95■■□□□ 1.9
VEGFA-220ENST00000519767 P2RY13Q9BPV8 354 aa26.95■■□□□ 1.9
VEGFA-220ENST00000519767 DPEP3Q9H4B8 488 aa26.95■■□□□ 1.9
VEGFA-220ENST00000519767 TRAF3IP3Q9Y228 551 aa26.95■■□□□ 1.9
VEGFA-220ENST00000519767 ATP8B3O60423 1300 aa26.94■■□□□ 1.9
VEGFA-220ENST00000519767 CHURC1-FNTBB4DL54 471 aa26.94■■□□□ 1.9
VEGFA-220ENST00000519767 MAPK13O15264 365 aa26.94■■□□□ 1.9
VEGFA-220ENST00000519767 RHOBTB3O94955 611 aa26.94■■□□□ 1.9
VEGFA-220ENST00000519767 SDHBP21912 280 aa26.94■■□□□ 1.9
VEGFA-220ENST00000519767 GJA4P35212 333 aa26.94■■□□□ 1.9
VEGFA-220ENST00000519767 FNTBP49356 437 aa26.94■■□□□ 1.9
VEGFA-220ENST00000519767 TTC16Q8NEE8 873 aa26.94■■□□□ 1.9
VEGFA-220ENST00000519767 ZNF518BQ9C0D4 1074 aa26.94■■□□□ 1.9
VEGFA-220ENST00000519767 HRO43593 1189 aa26.93■■□□□ 1.9
VEGFA-220ENST00000519767 CLSTN1O94985 981 aa26.93■■□□□ 1.9
VEGFA-220ENST00000519767 RTN3O95197 1032 aaPredicted RBP26.93■■□□□ 1.9
VEGFA-220ENST00000519767 VNN1O95497 513 aa26.93■■□□□ 1.9
VEGFA-220ENST00000519767 CDH8P55286 799 aa26.93■■□□□ 1.9
VEGFA-220ENST00000519767 SLC7A9P82251 487 aa26.93■■□□□ 1.9
VEGFA-220ENST00000519767 SIM2Q14190 667 aaPredicted RBP26.93■■□□□ 1.9
VEGFA-220ENST00000519767 PUM1Q14671 1186 aaKnown RBP eCLIP26.93■■□□□ 1.91e-7■■■□□ 15.4
VEGFA-220ENST00000519767 EML3Q32P44 896 aa26.93■■□□□ 1.9
VEGFA-220ENST00000519767 ZACNQ401N2 412 aa26.93■■□□□ 1.9
VEGFA-220ENST00000519767 NUP93Q8N1F7 819 aa26.93■■□□□ 1.9
VEGFA-220ENST00000519767 CCDC26Q8TAB7 109 aa26.93■■□□□ 1.9
VEGFA-220ENST00000519767 RMDN1Q96DB5 314 aa26.93■■□□□ 1.9
VEGFA-220ENST00000519767 CHFRQ96EP1 664 aa26.93■■□□□ 1.9
VEGFA-220ENST00000519767 SMYD3Q9H7B4 428 aa26.93■■□□□ 1.9
VEGFA-220ENST00000519767 WNT6Q9Y6F9 365 aa26.93■■□□□ 1.9
VEGFA-220ENST00000519767 YWHAQP27348 245 aa26.92■■□□□ 1.9
VEGFA-220ENST00000519767 DLG4P78352 724 aa26.92■■□□□ 1.9
VEGFA-220ENST00000519767 TAF10Q12962 218 aa26.92■■□□□ 1.9
VEGFA-220ENST00000519767 NFIL3Q16649 462 aa26.92■■□□□ 1.9
VEGFA-220ENST00000519767 CEP135Q66GS9 1140 aa26.92■■□□□ 1.9
VEGFA-220ENST00000519767 PDZD8Q8NEN9 1154 aa26.92■■□□□ 1.9
VEGFA-220ENST00000519767 OVCA2Q8WZ82 227 aa26.92■■□□□ 1.9
VEGFA-220ENST00000519767 CCDC34Q96HJ3 373 aa26.92■■□□□ 1.9
VEGFA-220ENST00000519767 LINC00597Q9H2U6 94 aa26.92■■□□□ 1.9
VEGFA-220ENST00000519767 GTF3C3Q9Y5Q9 886 aa26.92■■□□□ 1.9
VEGFA-220ENST00000519767 CCDC163A0A0D9SF12 145 aa26.91■■□□□ 1.9
VEGFA-220ENST00000519767 PRR5-ARHGAP8B1AHC4 643 aa26.91■■□□□ 1.9
VEGFA-220ENST00000519767 NFATC1O95644 943 aa26.91■■□□□ 1.9
VEGFA-220ENST00000519767 RETP07949 1114 aa26.91■■□□□ 1.9
VEGFA-220ENST00000519767 RPL13P26373 211 aaKnown RBP26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms