RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 POLRMTO00411 1230 aaKnown RBP2.38□□□□□ -2.03
CCNC-208ENST00000519617 SGTAO43765 313 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 SOAT2O75908 522 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 DNAJB5O75953 348 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 NXPH3O95157 252 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 ALDH9A1P49189 494 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 AMPHP49418 695 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 NDUFV1P49821 464 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 ZNF134P52741 427 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 RAB39AQ14964 217 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 WDR43Q15061 677 aaKnown RBP eCLIP2.38□□□□□ -2.03
CCNC-208ENST00000519617 MIDNQ504T8 468 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 MEX3CQ5U5Q3 659 aaKnown RBP2.38□□□□□ -2.03
CCNC-208ENST00000519617 SLC29A4Q7RTT9 530 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 KRT28Q7Z3Y7 464 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 ZNF804AQ7Z570 1209 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 PDSS2Q86YH6 399 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 FAM109AQ8N4B1 249 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 NGEFQ8N5V2 710 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 AOPEPQ8N6M6 819 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 FANCBQ8NB91 859 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 FBXO41Q8TF61 875 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 ATRIPQ8WXE1 791 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 SSH1Q8WYL5 1049 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 UBXN4Q92575 508 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 PTPRUQ92729 1446 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 SCAMP4Q969E2 229 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 MRGPRX4Q96LA9 322 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 SLC2A13Q96QE2 648 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 CHMP4AQ9BY43 222 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 ACTRT3Q9BYD9 372 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 SLC12A5Q9H2X9 1139 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 EBF3Q9H4W6 596 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 ETAA1Q9NY74 926 aa2.38□□□□□ -2.03
CCNC-208ENST00000519617 MRPL42Q9Y6G3 142 aaKnown RBP2.38□□□□□ -2.03
CCNC-208ENST00000519617 ASXL1Q8IXJ9 1541 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 DISP3Q9P2K9 1392 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 SETD1AO15047 1707 aaKnown RBP2.37□□□□□ -2.03
CCNC-208ENST00000519617 USP6P35125 1406 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 MST1RQ04912 1400 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 NSD3Q9BZ95 1437 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 MYMKA6NI61 221 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 PRR23D1E9PI22 279 aaPredicted RBP2.37□□□□□ -2.03
CCNC-208ENST00000519617 CCER2I3L3R5 266 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 SMIM22K7EJ46 135 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 PRR23D2P0DMB1 279 aaPredicted RBP2.37□□□□□ -2.03
CCNC-208ENST00000519617 PLCD1P51178 756 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 EVA1CP58658 441 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 LINC00205P59089 165 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 ZNF280AP59817 542 aaPredicted RBP2.37□□□□□ -2.03
CCNC-208ENST00000519617 CALD1Q05682 793 aaKnown RBP2.37□□□□□ -2.03
CCNC-208ENST00000519617 LMOD3Q0VAK6 560 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 STAT4Q14765 748 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 RABEP1Q15276 862 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 TWIST1Q15672 202 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 ZNF618Q5T7W0 954 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 TEDDM1Q5T9Z0 273 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 SLC30A10Q6XR72 485 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 BRINP3Q76B58 766 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 WDR53Q7Z5U6 358 aaPredicted RBP2.37□□□□□ -2.03
CCNC-208ENST00000519617 DTX2Q86UW9 622 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 JAZF1Q86VZ6 243 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.37□□□□□ -2.03
CCNC-208ENST00000519617 UBR7Q8N806 425 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 C8orf58Q8NAV2 365 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 KLHDC4Q8TBB5 520 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 RAB24Q969Q5 203 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 DRC1Q96MC2 740 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 CAAP1Q9H8G2 361 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 DLL3Q9NYJ7 618 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 CALCOCO1Q9P1Z2 691 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 SAP30BPQ9UHR5 308 aaKnown RBP2.37□□□□□ -2.03
CCNC-208ENST00000519617 AFG3L2Q9Y4W6 797 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 PCDHA13Q9Y5I0 950 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 TTC21BQ7Z4L5 1316 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 MAPK8IP3Q9UPT6 1336 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 FMN2Q9NZ56 1722 aa2.37□□□□□ -2.03
CCNC-208ENST00000519617 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.37□□□□□ -2.03
CCNC-208ENST00000519617 A0A1W2PP64 1363 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 RTL1A6NKG5 1358 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 JCADQ9P266 1359 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 PLEKHH1Q9ULM0 1364 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 CPSF1Q10570 1443 aaKnown RBP2.36□□□□□ -2.03
CCNC-208ENST00000519617 TNS3Q68CZ2 1445 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 IGKV2D-30A0A075B6S6 120 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 CCDC187A0A096LP49 1063 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 H0YIZ8 118 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 K7ESF4 209 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 SOCS2O14508 198 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 ENPP3O14638 875 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 FYB1O15117 783 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 PPM1GO15355 546 aaPredicted RBP2.36□□□□□ -2.03
CCNC-208ENST00000519617 BCAR3O75815 825 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 PRKD3O94806 890 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 EYA4O95677 639 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 SOX5P35711 763 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 GYS2P54840 703 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 EEFSECP57772 596 aaKnown RBP2.36□□□□□ -2.03
CCNC-208ENST00000519617 ERVK-21P61565 698 aa2.36□□□□□ -2.03
CCNC-208ENST00000519617 HOXA4Q00056 320 aaPredicted RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms