RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 CACNA2D1P54289 1103 aa18.47■□□□□ 0.55
CTNNA1-206ENST00000517980 CDH8P55286 799 aa18.47■□□□□ 0.55
CTNNA1-206ENST00000517980 ZXDBP98169 803 aa18.47■□□□□ 0.55
CTNNA1-206ENST00000517980 TRPC3Q13507 836 aa18.47■□□□□ 0.55
CTNNA1-206ENST00000517980 KNOP1Q1ED39 458 aaKnown RBP18.47■□□□□ 0.55
CTNNA1-206ENST00000517980 VSTM1Q6UX27 236 aa18.47■□□□□ 0.55
CTNNA1-206ENST00000517980 OSCP1Q8WVF1 389 aa18.47■□□□□ 0.55
CTNNA1-206ENST00000517980 CHAMP1Q96JM3 812 aa18.47■□□□□ 0.55
CTNNA1-206ENST00000517980 SPATA17Q96L03 361 aa18.47■□□□□ 0.55
CTNNA1-206ENST00000517980 PVALEFA0A1B0GWK0 134 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 F8VP50 259 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 AXIN1O15169 862 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 EXOC3O60645 756 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 PHACTR2O75167 634 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 ANXA13P27216 316 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 TNNC1P63316 161 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 IFRD2Q12894 506 aaPredicted RBP18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 KCNB1Q14721 858 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 MAPRE1Q15691 268 aaKnown RBP18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 EML3Q32P44 896 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 DENND5BQ6ZUT9 1274 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 WDR5BQ86VZ2 330 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 FAM160A2Q8N612 972 aaPredicted RBP18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 P2RY13Q9BPV8 354 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 RNF38Q9H0F5 515 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 TMEM30AQ9NV96 361 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 TRPM5Q9NZQ8 1165 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 RCOR1Q9UKL0 485 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 SLC8A2Q9UPR5 921 aa18.46■□□□□ 0.55
CTNNA1-206ENST00000517980 MYO16Q9Y6X6 1858 aa18.46■□□□□ 0.54
CTNNA1-206ENST00000517980 HELZP42694 1942 aaKnown RBP18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 NCOR2Q9Y618 2525 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 ANTXRLA6NF34 631 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 A8MXQ7 604 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 PRR5-ARHGAP8B1AHC4 643 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 SCAMP3O14828 347 aaKnown RBP18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 KLRC4O43908 158 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 TACC1O75410 805 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 CNR2P34972 360 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 SNRPFP62306 86 aaKnown RBP18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 ARHGAP8P85298 464 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 AMPD2Q01433 879 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 LMNB2Q03252 620 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 STK4Q13043 487 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 PSMD2Q13200 908 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 CCDC6Q16204 474 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 CEP57L1Q8IYX8 460 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 CPA6Q8N4T0 437 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 EZH1Q92800 747 aaPredicted RBP18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 PAGE5Q96GU1 130 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 B3GNT5Q9BYG0 378 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 ZNF518BQ9C0D4 1074 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 XYLT2Q9H1B5 865 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 MAGEF1Q9HAY2 307 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 CDV3Q9UKY7 258 aaKnown RBP18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 UBE4BO95155 1302 aa18.45■□□□□ 0.54
CTNNA1-206ENST00000517980 ATG13O75143 517 aa18.44■□□□□ 0.54
CTNNA1-206ENST00000517980 CLSTN1O94985 981 aa18.44■□□□□ 0.54
CTNNA1-206ENST00000517980 DRD1P21728 446 aa18.44■□□□□ 0.54
CTNNA1-206ENST00000517980 HOXA6P31267 233 aa18.44■□□□□ 0.54
CTNNA1-206ENST00000517980 RAP1GAPP47736 663 aa18.44■□□□□ 0.54
CTNNA1-206ENST00000517980 USP4Q13107 963 aa18.44■□□□□ 0.54
CTNNA1-206ENST00000517980 BMT2Q1RMZ1 405 aa18.44■□□□□ 0.54
CTNNA1-206ENST00000517980 CD101Q93033 1021 aa18.44■□□□□ 0.54
CTNNA1-206ENST00000517980 ATP2A3Q93084 1043 aa18.44■□□□□ 0.54
CTNNA1-206ENST00000517980 HHIPQ96QV1 700 aa18.44■□□□□ 0.54
CTNNA1-206ENST00000517980 SEMA4GQ9NTN9 838 aa18.44■□□□□ 0.54
CTNNA1-206ENST00000517980 CFAP45Q9UL16 551 aa18.44■□□□□ 0.54
CTNNA1-206ENST00000517980 ABCA7Q8IZY2 2146 aa18.44■□□□□ 0.54
CTNNA1-206ENST00000517980 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 A0A1B0GVL5 298 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 ZNF840PA6NDX5 716 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 LEFTY2O00292 366 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 TRIM66O15016 1216 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 ACTN4O43707 911 aaKnown RBP18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 GDF9O60383 454 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 SLFN14P0C7P3 912 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 TAF10Q12962 218 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 NR1H3Q13133 447 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 BIRC3Q13489 604 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 KMT5BQ4FZB7 885 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 TDRD10Q5VZ19 366 aaKnown RBP18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 KBTBD6Q86V97 674 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 C12orf56Q8IXR9 622 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 B3GALNT2Q8NCR0 500 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 KIAA0895Q8NCT3 520 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 RPLP0P6Q8NHW5 317 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 PARD3BQ8TEW8 1205 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 C8orf48Q96LL4 319 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 KCNK16Q96T55 309 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 TTLL2Q9BWV7 592 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 SMYD3Q9H7B4 428 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 SMPD4Q9NXE4 827 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 CHORDC1Q9UHD1 332 aaPredicted RBP18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 ARHGAP26Q9UNA1 814 aa18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 MYO18AQ92614 2054 aaKnown RBP18.43■□□□□ 0.54
CTNNA1-206ENST00000517980 LRRIQ3A6PVS8 624 aaPredicted RBP18.42■□□□□ 0.54
CTNNA1-206ENST00000517980 VNN1O95497 513 aa18.42■□□□□ 0.54
CTNNA1-206ENST00000517980 C4BPAP04003 597 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms