RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 PDZD7Q9H5P4 517 aa6.18□□□□□ -1.42
LINC00535-202ENST00000517785 CLMPQ9H6B4 373 aa6.18□□□□□ -1.42
LINC00535-202ENST00000517785 GPRC5CQ9NQ84 441 aa6.18□□□□□ -1.42
LINC00535-202ENST00000517785 RGL1Q9NZL6 768 aa6.18□□□□□ -1.42
LINC00535-202ENST00000517785 VPS54Q9P1Q0 977 aa6.18□□□□□ -1.42
LINC00535-202ENST00000517785 AFF4Q9UHB7 1163 aaKnown RBP6.18□□□□□ -1.42
LINC00535-202ENST00000517785 SLC6A14Q9UN76 642 aa6.18□□□□□ -1.42
LINC00535-202ENST00000517785 CCL26Q9Y258 94 aa6.18□□□□□ -1.42
LINC00535-202ENST00000517785 CITO14578 2027 aa6.18□□□□□ -1.42
LINC00535-202ENST00000517785 MYOFQ9NZM1 2061 aa6.18□□□□□ -1.42
LINC00535-202ENST00000517785 MGAQ8IWI9 3026 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 DENND4CQ5VZ89 1909 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 MYO9AB2RTY4 2548 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 KLF18A0A0U1RQI7 1052 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 TRABD2BA6NFA1 517 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.17□□□□□ -1.42
LINC00535-202ENST00000517785 UPK3BL1B0FP48 263 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 UPK3BL2E5RIL1 263 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 H7C4K7 107 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 SLC37A4O43826 429 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 P4HBP07237 508 aaKnown RBP6.17□□□□□ -1.42
LINC00535-202ENST00000517785 KRT10P13645 584 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 HNRNPLP14866 589 aaKnown RBP eCLIP6.17□□□□□ -1.42
LINC00535-202ENST00000517785 GSPT1P15170 499 aaKnown RBP6.17□□□□□ -1.42
LINC00535-202ENST00000517785 DRD1P21728 446 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 CHMLP26374 656 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 GNA11P29992 359 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 EPHB3P54753 998 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 GFPT1Q06210 699 aaPredicted RBP6.17□□□□□ -1.42
LINC00535-202ENST00000517785 DUSP4Q13115 394 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 HDAC1Q13547 482 aaPredicted RBP6.17□□□□□ -1.42
LINC00535-202ENST00000517785 MXD4Q14582 209 aaPredicted RBP6.17□□□□□ -1.42
LINC00535-202ENST00000517785 PTPAQ15257 358 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 PCBP1Q15365 356 aaKnown RBP eCLIP6.17□□□□□ -1.42
LINC00535-202ENST00000517785 Q4G0T1 1027 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 ARHGAP15Q53QZ3 475 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 CCDC157Q569K6 752 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 C2orf27AQ580R0 203 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 TPGS2Q68CL5 300 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 NCAPH2Q6IBW4 605 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 ZNF280DQ6N043 979 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 SLC23A3Q6PIS1 610 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 TOGARAM2Q6ZUX3 1019 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 C11orf74Q86VG3 221 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 SGMS1Q86VZ5 419 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 NAXDQ8IW45 347 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 TEX2Q8IWB9 1127 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 TTC9BQ8N6N2 239 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 RIN3Q8TB24 985 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 CNOT6LQ96LI5 555 aaKnown RBP6.17□□□□□ -1.42
LINC00535-202ENST00000517785 FCRL3Q96P31 734 aaPredicted RBP6.17□□□□□ -1.42
LINC00535-202ENST00000517785 PPP1R10Q96QC0 940 aaKnown RBP6.17□□□□□ -1.42
LINC00535-202ENST00000517785 LPIN3Q9BQK8 851 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 FAM83CQ9BQN1 747 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 MTA3Q9BTC8 594 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 C2orf49Q9BVC5 232 aaPredicted RBP6.17□□□□□ -1.42
LINC00535-202ENST00000517785 ZDHHC4Q9NPG8 344 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 THG1LQ9NWX6 298 aaKnown RBP6.17□□□□□ -1.42
LINC00535-202ENST00000517785 PILRBQ9UKJ0 227 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 VAV3Q9UKW4 847 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 NUB1Q9Y5A7 615 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 TIMM13Q9Y5L4 95 aaPredicted RBP6.17□□□□□ -1.42
LINC00535-202ENST00000517785 COL12A1Q99715 3063 aa6.17□□□□□ -1.42
LINC00535-202ENST00000517785 OBSL1O75147 1896 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 ANK1P16157 1881 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 A0A087WV48 116 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 TNFRSF10BO14763 440 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 SLC27A2O14975 620 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 SYN3O14994 580 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 N4BP3O15049 544 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 SGSM2O43147 1006 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 USO1O60763 962 aaKnown RBP6.16□□□□□ -1.42
LINC00535-202ENST00000517785 MCM4P33991 863 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 GJA4P35212 333 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 ARL2P36404 184 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 USP11P51784 963 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 OSTNP61366 133 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 CFHR1Q03591 330 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 PLD1Q13393 1074 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 MRPL58Q14197 206 aaKnown RBP6.16□□□□□ -1.42
LINC00535-202ENST00000517785 OTUD6AQ7L8S5 288 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 DNAJB7Q7Z6W7 309 aaPredicted RBP6.16□□□□□ -1.42
LINC00535-202ENST00000517785 RASSF3Q86WH2 238 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 TPH2Q8IWU9 490 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 EXOC8Q8IYI6 725 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 CEP120Q8N960 986 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 STKLD1Q8NE28 680 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 CCDC12Q8WUD4 166 aaPredicted RBP6.16□□□□□ -1.42
LINC00535-202ENST00000517785 NUDT8Q8WV74 236 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 HMGB4Q8WW32 186 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 RUFY2Q8WXA3 655 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 SCG3Q8WXD2 468 aaKnown RBP6.16□□□□□ -1.42
LINC00535-202ENST00000517785 CD101Q93033 1021 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 ERLEC1Q96DZ1 483 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 SPACA7Q96KW9 195 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 CCDC43Q96MW1 224 aaKnown RBP6.16□□□□□ -1.42
LINC00535-202ENST00000517785 UROC1Q96N76 676 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 ADPGKQ9BRR6 497 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 SLC46A2Q9BY10 475 aa6.16□□□□□ -1.42
LINC00535-202ENST00000517785 PRORYQ9H606 182 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms