RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 PCSK1P29120 753 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 TIE1P35590 1138 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 EIF2DP41214 584 aaKnown RBP9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 LHX1P48742 406 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 TOB1P50616 345 aaPredicted RBP9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 ST3GAL1Q11201 340 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 RESTQ13127 1097 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 DHX8Q14562 1220 aaKnown RBP9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 POSTNQ15063 836 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 CFAP221Q4G0U5 840 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 PREPLQ4J6C6 727 aaPredicted RBP9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 RILPL1Q5EBL4 403 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 C4orf50Q6ZRC1 276 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 NUDT18Q6ZVK8 323 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 TRMT11Q7Z4G4 463 aaKnown RBP9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 PIP4P1Q86T03 277 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 PROSER1Q86XN7 944 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 PDCL2Q8N4E4 241 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 ALLCQ8N6M5 410 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 CACTINQ8WUQ7 758 aaKnown RBP9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 HMGB4Q8WW32 186 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 POMGNT1Q8WZA1 660 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 SLC22A12Q96S37 553 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 PNKPQ96T60 521 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 LINC00597Q9H2U6 94 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 TRPM5Q9NZQ8 1165 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 GCNT4Q9P109 453 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 PILRBQ9UKJ0 227 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 KIF3AQ9Y496 699 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 PTPRBP23467 1997 aa9.72□□□□□ -0.85
LINCR-0001-201ENST00000517732 ACACAQ13085 2346 aa9.71□□□□□ -0.85
LINCR-0001-201ENST00000517732 FAM221BA6H8Z2 402 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 C2orf78A6NCI8 922 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 LEFTY2O00292 366 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 KAT7O95251 611 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 CYP17A1P05093 508 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 ITGB3P05106 788 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 SERPINF2P08697 491 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 ACAT1P24752 427 aaKnown RBP9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 POLR2BP30876 1174 aaKnown RBP9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 UBA7P41226 1012 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 PTGER3P43115 390 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 PPP3CCP48454 512 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 ATP2C1P98194 919 aaPredicted RBP9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 TFAMQ00059 246 aaKnown RBP9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 GTF2BQ00403 316 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 RPL6Q02878 288 aaKnown RBP9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 MAPRE1Q15691 268 aaKnown RBP9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 IL17AQ16552 155 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 TMEM119Q4V9L6 283 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 ZC2HC1CQ53FD0 456 aaPredicted RBP9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 PEAR1Q5VY43 1037 aaPredicted RBP9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 SLC39A4Q6P5W5 647 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 TMEM92Q6UXU6 159 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 FILIP1Q7Z7B0 1213 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 DDX42Q86XP3 938 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 CHCHD4Q8N4Q1 142 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 MINDY1Q8N5J2 469 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 KIAA1958Q8N8K9 716 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 ZSCAN31Q96LW9 406 aaPredicted RBP9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 FNBP1Q96RU3 617 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 ARHGEF4Q9NR80 690 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 TMEM74BQ9NUR3 256 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 MAGEC2Q9UBF1 373 aaPredicted RBP9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 GTF3C4Q9UKN8 822 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 L1RE1Q9UN81 338 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 AGAP1Q9UPQ3 857 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 EXOC7Q9UPT5 735 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 PLXNB3Q9ULL4 1909 aa9.71□□□□□ -0.86
LINCR-0001-201ENST00000517732 ANKRD63C9JTQ0 380 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 SGK1O00141 431 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 KRT19P08727 400 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 ITPKAP23677 461 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 GRIK1P39086 918 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 GRIA2P42262 883 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 MAGEA11P43364 429 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 ZNF131P52739 623 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 KDSRQ06136 332 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 DHCR24Q15392 516 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 MAP7D1Q3KQU3 841 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 ARSHQ5FYA8 562 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 BTBD8Q5XKL5 378 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 ARL6IP4Q66PJ3 421 aaKnown RBP9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 MCTP1Q6DN14 999 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 C19orf48Q6RUI8 117 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 VSTM1Q6UX27 236 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 DENND5BQ6ZUT9 1274 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 PDZD3Q86UT5 571 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 ADGRF2Q8IZF7 708 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 TOP6BLQ8N6T0 577 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 LRRC52Q8N7C0 313 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 IL17RCQ8NAC3 791 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 SPRYD3Q8NCJ5 442 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 HVCN1Q96D96 273 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 AK8Q96MA6 479 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 CEP295NLQ96MC4 621 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 CCDC86Q9H6F5 360 aaKnown RBP9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 TBC1D14Q9P2M4 693 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 SUSD2Q9UGT4 822 aa9.7□□□□□ -0.86
LINCR-0001-201ENST00000517732 MBD1Q9UIS9 605 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms