RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 HMGXB4Q9UGU5 601 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 RWDD2AQ9UIY3 292 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 CA14Q9ULX7 337 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 TICRRQ7Z2Z1 1910 aa13.58□□□□□ -0.24
CLCN3-210ENST00000515420 GOLGA6L22H0YM25 854 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 ZNF263O14978 683 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 RTN3O95197 1032 aaPredicted RBP13.57□□□□□ -0.24
CLCN3-210ENST00000515420 GLULP15104 373 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 RFX1P22670 979 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 FMO5P49326 533 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 PLCB2Q00722 1185 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 CETN1Q12798 172 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 GRM2Q14416 872 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 ARHGAP29Q52LW3 1261 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 C1orf228Q6PIY5 440 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 PAQR9Q6ZVX9 377 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 TRIM59Q8IWR1 403 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 YAF2Q8IY57 180 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 FUKQ8N0W3 1084 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 TMEM105Q8N8V8 129 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 MAB21L3Q8N8X9 362 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 STKLD1Q8NE28 680 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 PDZD8Q8NEN9 1154 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 FLCNQ8NFG4 579 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 ELMO3Q96BJ8 720 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 MSANTD3Q96H12 275 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 HNRNPABQ99729 332 aaKnown RBP13.57□□□□□ -0.24
CLCN3-210ENST00000515420 NUP62CLQ9H1M0 184 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 CSNK1G1Q9HCP0 422 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 TMEM30AQ9NV96 361 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 NCANO14594 1321 aa13.57□□□□□ -0.24
CLCN3-210ENST00000515420 KANSL1LA0AUZ9 987 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 ARNTLO00327 626 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 CLDN5O00501 218 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 PRAMEF12O95522 483 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 CCDC192P0DO97 292 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 TCF3P15923 654 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 TBXAS1P24557 533 aaPredicted RBP13.56□□□□□ -0.24
CLCN3-210ENST00000515420 GDI1P31150 447 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 CACNA2D1P54289 1103 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 YWHAEP62258 255 aaKnown RBP13.56□□□□□ -0.24
CLCN3-210ENST00000515420 TXNDC8Q6A555 127 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 NUP93Q8N1F7 819 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 BPIFB1Q8TDL5 484 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 WHAMMQ8TF30 809 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 RSPRY1Q96DX4 576 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 SLITRK1Q96PX8 696 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 NELL2Q99435 816 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 MED10Q9BTT4 135 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 IRF2BPLQ9H1B7 796 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 PNPLA8Q9NP80 782 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 KRT82Q9NSB4 513 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 TDP1Q9NUW8 608 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 THG1LQ9NWX6 298 aaKnown RBP13.56□□□□□ -0.24
CLCN3-210ENST00000515420 IL37Q9NZH6 218 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 TRPM5Q9NZQ8 1165 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 RAPGEFL1Q9UHV5 662 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 MRPS17Q9Y2R5 130 aaKnown RBP13.56□□□□□ -0.24
CLCN3-210ENST00000515420 F5P12259 2224 aa13.56□□□□□ -0.24
CLCN3-210ENST00000515420 TRAV19A0A0A6YYK7 116 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 FAM92AA1XBS5 289 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 MAN2B1O00754 1011 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 TNFRSF10BO14763 440 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 GALR2O43603 387 aaPredicted RBP13.55□□□□□ -0.24
CLCN3-210ENST00000515420 LRRN2O75325 713 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 AP1G2O75843 785 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 USP17L7P0C7H9 530 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 FAM200BP0CF97 657 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 CD58P19256 250 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 MAGEA9P43362 315 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 PTPN5P54829 565 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 STX17P56962 302 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 USP46P62068 366 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 CT47A1Q5JQC4 288 aaPredicted RBP13.55□□□□□ -0.24
CLCN3-210ENST00000515420 CCDC105Q8IYK2 499 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 KIAA1958Q8N8K9 716 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 PJA1Q8NG27 643 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 SLC2A14Q8TDB8 520 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 USP13Q92995 863 aaPredicted RBP13.55□□□□□ -0.24
CLCN3-210ENST00000515420 TWNKQ96RR1 684 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 SRRTQ9BXP5 876 aaKnown RBP13.55□□□□□ -0.24
CLCN3-210ENST00000515420 HEBP1Q9NRV9 189 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 CISHQ9NSE2 258 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 GCNT4Q9P109 453 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 DACH1Q9UI36 760 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 SIT1Q9Y3P8 196 aa13.55□□□□□ -0.24
CLCN3-210ENST00000515420 ZNF840PA6NDX5 716 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 STK25O00506 426 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 OLFM2O95897 454 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 CCDC130P13994 396 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 YWHAQP27348 245 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 TUBP50607 506 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 SLC5A3P53794 718 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 USP4Q13107 963 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 CUL2Q13617 745 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 IER5LQ5T953 404 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 SNX30Q5VWJ9 437 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 ZNF852Q6ZMS4 543 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 TPRG1Q6ZUI0 275 aa13.54□□□□□ -0.24
CLCN3-210ENST00000515420 C12orf29Q8N999 325 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms