RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 TOP3AQ13472 1001 aaPredicted RBP6.48□□□□□ -1.37
CAST-243ENST00000515160 SMAD4Q13485 552 aaKnown RBP6.48□□□□□ -1.37
CAST-243ENST00000515160 ADCK5Q3MIX3 580 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 ARL6IP4Q66PJ3 421 aaKnown RBP6.48□□□□□ -1.37
CAST-243ENST00000515160 TRIM68Q6AZZ1 485 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 CFAP161Q6P656 301 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 TRMT10BQ6PF06 316 aaKnown RBP6.48□□□□□ -1.37
CAST-243ENST00000515160 MOGAT3Q86VF5 341 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.48□□□□□ -1.37
CAST-243ENST00000515160 YAF2Q8IY57 180 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 ESX1Q8N693 406 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 TTLL6Q8N841 843 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 KYQ8NBH2 561 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 STT3BQ8TCJ2 826 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 EID2BQ96D98 161 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 PYM1Q9BRP8 204 aaKnown RBP6.48□□□□□ -1.37
CAST-243ENST00000515160 C11orf84Q9BUA3 381 aaPredicted RBP6.48□□□□□ -1.37
CAST-243ENST00000515160 WASH6PQ9NQA3 447 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 JADE2Q9NQC1 790 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 VPS45Q9NRW7 570 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 RLIMQ9NVW2 624 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 GGA3Q9NZ52 723 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 RGL1Q9NZL6 768 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 SLC13A4Q9UKG4 626 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 RABGAP1Q9Y3P9 1069 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 IRS2Q9Y4H2 1338 aa6.48□□□□□ -1.37
CAST-243ENST00000515160 KDRP35968 1356 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 DLEC1Q9Y238 1755 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 ZNF831Q5JPB2 1677 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 PRSS29PA6NIE9 313 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 TMEM233B4DJY2 109 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 hCG_1984214I3L0E3 225 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 MTSS1O43312 755 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 ZNF500O60304 480 aaPredicted RBP6.47□□□□□ -1.37
CAST-243ENST00000515160 TNFRSF6BO95407 300 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 WNT11O96014 354 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 CD4P01730 458 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 GJB1P08034 283 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 IFIT1P09914 478 aaKnown RBP6.47□□□□□ -1.37
CAST-243ENST00000515160 SBK3P0C264 359 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 TXNP10599 105 aaKnown RBP6.47□□□□□ -1.37
CAST-243ENST00000515160 RARBP10826 455 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 PFKLP17858 780 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 IL1R2P27930 398 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 GABRB3P28472 473 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 CHRNA5P30532 468 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 HOXC9P31274 260 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 KRT9P35527 623 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 POLE2P56282 527 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 DDR1Q08345 913 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 FAM47AQ5JRC9 791 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 VPS53Q5VIR6 699 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 AFMIDQ63HM1 303 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 OTUD7BQ6GQQ9 843 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 LRRTM4Q86VH4 590 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 TMTC1Q8IUR5 882 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 SLC15A4Q8N697 577 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 AOPEPQ8N6M6 819 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 OR56A3Q8NH54 315 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 SPPL3Q8TCT6 385 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 ASB12Q8WXK4 309 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 HDAC2Q92769 488 aaKnown RBP6.47□□□□□ -1.37
CAST-243ENST00000515160 LPPQ93052 612 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 KATNAL1Q9BW62 490 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 UBN1Q9NPG3 1134 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 RIC8AQ9NPQ8 531 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 HDAC9Q9UKV0 1011 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 FAM184BQ9ULE4 1060 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 PLEKHM1Q9Y4G2 1056 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 RBM8AQ9Y5S9 174 aaKnown RBP6.47□□□□□ -1.37
CAST-243ENST00000515160 MAP3K19Q56UN5 1328 aa6.47□□□□□ -1.37
CAST-243ENST00000515160 ADAMTSL1Q8N6G6 1762 aa6.46□□□□□ -1.37
CAST-243ENST00000515160 DICER1Q9UPY3 1922 aaKnown RBP6.46□□□□□ -1.37
CAST-243ENST00000515160 ATRNL1Q5VV63 1379 aa6.46□□□□□ -1.37
CAST-243ENST00000515160 A0A087WWL8 130 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 NRP1O14786 923 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 SLC43A1O75387 559 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 UNC5CO95185 931 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 SLC11A2P49281 568 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 COPAP53621 1224 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 PTH1RQ03431 593 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 LTBP1Q14766 1721 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 PCOLCEQ15113 449 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 DCAF12L1Q5VU92 463 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 FYB2Q5VWT5 728 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 SULT6B1Q6IMI4 303 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 LIN54Q6MZP7 749 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 GATAD2AQ86YP4 633 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 FTSJ3Q8IY81 847 aaKnown RBP6.46□□□□□ -1.38
CAST-243ENST00000515160 OTUD7AQ8TE49 926 aaPredicted RBP6.46□□□□□ -1.38
CAST-243ENST00000515160 ZNF384Q8TF68 577 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 SPSB4Q96A44 273 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 SLC7A6OSQ96CW6 309 aaPredicted RBP6.46□□□□□ -1.38
CAST-243ENST00000515160 PRPF18Q99633 342 aaKnown RBP6.46□□□□□ -1.38
CAST-243ENST00000515160 KATNBL1Q9H079 304 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 ZNF552Q9H707 407 aaPredicted RBP6.46□□□□□ -1.38
CAST-243ENST00000515160 SAYSD1Q9NPB0 183 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 USP40Q9NVE5 1235 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 MID2Q9UJV3 735 aa6.46□□□□□ -1.38
CAST-243ENST00000515160 TMX2Q9Y320 296 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms