RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 LAMTOR5O43504 91 aa24.51■■□□□ 1.51
CLDND1-230ENST00000514537 GTF2H1P32780 548 aa24.51■■□□□ 1.51
CLDND1-230ENST00000514537 TNK2Q07912 1038 aa24.51■■□□□ 1.51
CLDND1-230ENST00000514537 PAQR9Q6ZVX9 377 aa24.51■■□□□ 1.51
CLDND1-230ENST00000514537 UNC93AQ86WB7 457 aa24.51■■□□□ 1.51
CLDND1-230ENST00000514537 TTC8Q8TAM2 541 aa24.51■■□□□ 1.51
CLDND1-230ENST00000514537 RIN3Q8TB24 985 aa24.51■■□□□ 1.51
CLDND1-230ENST00000514537 GTPBP4Q9BZE4 634 aaKnown RBP24.51■■□□□ 1.51
CLDND1-230ENST00000514537 CHRDQ9H2X0 955 aa24.51■■□□□ 1.51
CLDND1-230ENST00000514537 LMAN1LQ9HAT1 526 aa24.51■■□□□ 1.51
CLDND1-230ENST00000514537 TMEM8AQ9HCN3 771 aa24.51■■□□□ 1.51
CLDND1-230ENST00000514537 FBXO4Q9UKT5 387 aa24.51■■□□□ 1.51
CLDND1-230ENST00000514537 C2orf78A6NCI8 922 aa24.5■■□□□ 1.51
CLDND1-230ENST00000514537 USP17L7P0C7H9 530 aa24.5■■□□□ 1.51
CLDND1-230ENST00000514537 CHRNB1P11230 501 aa24.5■■□□□ 1.51
CLDND1-230ENST00000514537 CTHP32929 405 aa24.5■■□□□ 1.51
CLDND1-230ENST00000514537 NDST1P52848 882 aa24.5■■□□□ 1.51
CLDND1-230ENST00000514537 ITPRIPL2Q3MIP1 535 aa24.5■■□□□ 1.51
CLDND1-230ENST00000514537 ASCL5Q7RTU5 278 aa24.5■■□□□ 1.51
CLDND1-230ENST00000514537 CRYBG2Q8N1P7 616 aa24.5■■□□□ 1.51
CLDND1-230ENST00000514537 ARL14EPQ8N8R7 260 aaPredicted RBP24.5■■□□□ 1.51
CLDND1-230ENST00000514537 NKD2Q969F2 451 aaPredicted RBP24.5■■□□□ 1.51
CLDND1-230ENST00000514537 EEF2KMTQ96G04 330 aa24.5■■□□□ 1.51
CLDND1-230ENST00000514537 APOBEC3GQ9HC16 384 aaKnown RBP24.5■■□□□ 1.51
CLDND1-230ENST00000514537 TRPM5Q9NZQ8 1165 aa24.5■■□□□ 1.51
CLDND1-230ENST00000514537 CIZ1Q9ULV3 898 aaPredicted RBP24.5■■□□□ 1.51
CLDND1-230ENST00000514537 MIA3Q5JRA6 1907 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 RIF1Q5UIP0 2472 aaKnown RBP24.49■■□□□ 1.51
CLDND1-230ENST00000514537 PRR23AA6NEV1 266 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 CKMP06732 381 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 PFKLP17858 780 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 HDCP19113 662 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 PPP3CCP48454 512 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 MTAPQ13126 283 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 ZNF528Q3MIS6 628 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 KRT39Q6A163 491 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 TXNDC11Q6PKC3 985 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 MAMSTRQ6ZN01 415 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 ACOT1Q86TX2 421 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 FAM35AQ86V20 835 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 ZC3H3Q8IXZ2 948 aaKnown RBP24.49■■□□□ 1.51
CLDND1-230ENST00000514537 ADSSL1Q8N142 457 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 IMPG2Q9BZV3 1241 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 MMRN2Q9H8L6 949 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 HPS4Q9NQG7 708 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 TICRRQ7Z2Z1 1910 aa24.49■■□□□ 1.51
CLDND1-230ENST00000514537 ZNF840PA6NDX5 716 aa24.48■■□□□ 1.51
CLDND1-230ENST00000514537 ATP8B3O60423 1300 aa24.48■■□□□ 1.51
CLDND1-230ENST00000514537 EPB41P11171 864 aaKnown RBP24.48■■□□□ 1.51
CLDND1-230ENST00000514537 PTPRZ1P23471 2315 aaPredicted RBP24.48■■□□□ 1.51
CLDND1-230ENST00000514537 RUNX3Q13761 415 aa24.48■■□□□ 1.51
CLDND1-230ENST00000514537 ZNF77Q15935 545 aa24.48■■□□□ 1.51
CLDND1-230ENST00000514537 DENND4CQ5VZ89 1909 aa24.48■■□□□ 1.51
CLDND1-230ENST00000514537 ANKRD40Q6AI12 368 aa24.48■■□□□ 1.51
CLDND1-230ENST00000514537 CC2D1AQ6P1N0 951 aaPredicted RBP24.48■■□□□ 1.51
CLDND1-230ENST00000514537 FUKQ8N0W3 1084 aa24.48■■□□□ 1.51
CLDND1-230ENST00000514537 NUP93Q8N1F7 819 aa24.48■■□□□ 1.51
CLDND1-230ENST00000514537 KCNK16Q96T55 309 aa24.48■■□□□ 1.51
CLDND1-230ENST00000514537 TSG101Q99816 390 aa24.48■■□□□ 1.51
CLDND1-230ENST00000514537 IER2Q9BTL4 223 aa24.48■■□□□ 1.51
CLDND1-230ENST00000514537 MED10Q9BTT4 135 aa24.48■■□□□ 1.51
CLDND1-230ENST00000514537 SEMA4AQ9H3S1 761 aa24.48■■□□□ 1.51
CLDND1-230ENST00000514537 CYP3A43Q9HB55 503 aa24.48■■□□□ 1.51
CLDND1-230ENST00000514537 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.48■■□□□ 1.51
CLDND1-230ENST00000514537 HMGXB4Q9UGU5 601 aa24.48■■□□□ 1.51
CLDND1-230ENST00000514537 PTPRDP23468 1912 aa24.47■■□□□ 1.51
CLDND1-230ENST00000514537 TCF3P15923 654 aa24.47■■□□□ 1.51
CLDND1-230ENST00000514537 PDE6CP51160 858 aa24.47■■□□□ 1.51
CLDND1-230ENST00000514537 PMS1P54277 932 aaKnown RBP24.47■■□□□ 1.51
CLDND1-230ENST00000514537 FKBP3Q00688 224 aaKnown RBP24.47■■□□□ 1.51
CLDND1-230ENST00000514537 INCA1Q0VD86 236 aa24.47■■□□□ 1.51
CLDND1-230ENST00000514537 TAF10Q12962 218 aa24.47■■□□□ 1.51
CLDND1-230ENST00000514537 MTF1Q14872 753 aa24.47■■□□□ 1.51
CLDND1-230ENST00000514537 WDR44Q5JSH3 913 aa24.47■■□□□ 1.51
CLDND1-230ENST00000514537 TRIM68Q6AZZ1 485 aa24.47■■□□□ 1.51
CLDND1-230ENST00000514537 SMARCD1Q96GM5 515 aa24.47■■□□□ 1.51
CLDND1-230ENST00000514537 EBF3Q9H4W6 596 aa24.47■■□□□ 1.51
CLDND1-230ENST00000514537 ARHGAP26Q9UNA1 814 aa24.47■■□□□ 1.51
CLDND1-230ENST00000514537 R4GN57 208 aa24.47■■□□□ 1.51
CLDND1-230ENST00000514537 OTOL1A6NHN0 477 aaPredicted RBP24.46■■□□□ 1.51
CLDND1-230ENST00000514537 KINO60870 393 aaKnown RBP24.46■■□□□ 1.51
CLDND1-230ENST00000514537 GADD45BO75293 160 aaPredicted RBP24.46■■□□□ 1.51
CLDND1-230ENST00000514537 RTN3O95197 1032 aaPredicted RBP24.46■■□□□ 1.51
CLDND1-230ENST00000514537 CSTF1Q05048 431 aaKnown RBP24.46■■□□□ 1.51
CLDND1-230ENST00000514537 USP4Q13107 963 aa24.46■■□□□ 1.51
CLDND1-230ENST00000514537 ORC1Q13415 861 aa24.46■■□□□ 1.51
CLDND1-230ENST00000514537 PDGFRLQ15198 375 aa24.46■■□□□ 1.51
CLDND1-230ENST00000514537 SEMA4DQ92854 862 aa24.46■■□□□ 1.51
CLDND1-230ENST00000514537 SLITRK1Q96PX8 696 aa24.46■■□□□ 1.51
CLDND1-230ENST00000514537 NIF3L1Q9GZT8 377 aa24.46■■□□□ 1.51
CLDND1-230ENST00000514537 DMAP1Q9NPF5 467 aaPredicted RBP24.46■■□□□ 1.51
CLDND1-230ENST00000514537 PRMT8Q9NR22 394 aaPredicted RBP24.46■■□□□ 1.51
CLDND1-230ENST00000514537 IL37Q9NZH6 218 aa24.46■■□□□ 1.51
CLDND1-230ENST00000514537 TNFRSF10BO14763 440 aa24.45■■□□□ 1.5
CLDND1-230ENST00000514537 SLC16A3O15427 465 aaKnown RBP24.45■■□□□ 1.5
CLDND1-230ENST00000514537 STX10O60499 249 aa24.45■■□□□ 1.5
CLDND1-230ENST00000514537 AP1G2O75843 785 aa24.45■■□□□ 1.5
CLDND1-230ENST00000514537 CCDC130P13994 396 aa24.45■■□□□ 1.5
CLDND1-230ENST00000514537 YWHAQP27348 245 aa24.45■■□□□ 1.5
CLDND1-230ENST00000514537 LRRC63Q05C16 580 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms