RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	IZUMO1	Q8IYV9	350 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	DPF1	Q92782	380 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	SPSB4	Q96A44	273 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	TRIM43	Q96BQ3	446 aa	Predicted RBP	5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	PPP1R9B	Q96SB3	815 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	INO80B	Q9C086	356 aa	Predicted RBP	5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	LRRC27	Q9C0I9	530 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	ADAMTS5	Q9UNA0	930 aa		5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	MRPS17	Q9Y2R5	130 aa	Known RBP	5.15	□□□□□ -1.59
MATR3-223	ENST00000514402	CFAP69	A5D8W1	941 aa		5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	MANSC4	A6NHS7	340 aa	Predicted RBP	5.14	□□□□□ -1.59
MATR3-223	ENST00000514402		H7C1Q1	480 aa		5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	RPL17	P18621	184 aa	Known RBP	5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	PRKAG1	P54619	331 aa		5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	PDE1A	P54750	535 aa		5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	FAM193A	P78312	1265 aa		5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	HOXA4	Q00056	320 aa	Predicted RBP	5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	SP2	Q02086	613 aa		5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	GBX1	Q14549	363 aa		5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	PROSER3	Q2NL68	480 aa		5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	ZIK1	Q3SY52	487 aa	Predicted RBP	5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	PCID2	Q5JVF3	399 aa		5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	MPP5	Q8N3R9	675 aa		5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	ABHD11	Q8NFV4	315 aa		5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	BPIFB1	Q8TDL5	484 aa		5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	LRTOMT	Q8WZ04	291 aa		5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	MAML1	Q92585	1016 aa		5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	DHX36	Q9H2U1	1008 aa	Known RBP	5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	AFF4	Q9UHB7	1163 aa	Known RBP	5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	TNFRSF18	Q9Y5U5	241 aa		5.14	□□□□□ -1.59
MATR3-223	ENST00000514402	LATS1	O95835	1130 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	CELA2A	P08217	269 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	BRAF	P15056	766 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	ENG	P17813	658 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	CERS1	P27544	350 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	BCAT1	P54687	386 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	SRSF4	Q08170	494 aa	Known RBP	5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	GRM1	Q13255	1194 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	CCNI	Q14094	377 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	CNGA2	Q16280	664 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	TMEM63B	Q5T3F8	832 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	DEPDC1	Q5TB30	811 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	DCAF12L1	Q5VU92	463 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	DARS2	Q6PI48	645 aa	Known RBP	5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	MICU3	Q86XE3	530 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	RAB11FIP4	Q86YS3	637 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	SPART	Q8N0X7	666 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	XAGE5	Q8WWM1	108 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	R3HDM4	Q96D70	268 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	APIP	Q96GX9	242 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	THAP7	Q9BT49	309 aa	Predicted RBP	5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	DPCD	Q9BVM2	203 aa	Predicted RBP	5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	TRIM5	Q9C035	493 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	PRDM11	Q9NQV5	511 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	SH3BP4	Q9P0V3	963 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	CDY1	Q9Y6F8	540 aa		5.13	□□□□□ -1.59
MATR3-223	ENST00000514402	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	LOC102723971	A0A1B0GUV8	181 aa		5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	PYCARD-AS1	I3L0S3	204 aa		5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	GOLIM4	O00461	696 aa		5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	MGEA5	O60502	916 aa		5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	MYB	P10242	640 aa		5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	MYCL	P12524	364 aa	Predicted RBP	5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	MYF5	P13349	255 aa		5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	SUMO3	P55854	103 aa	Predicted RBP	5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	TUBA4A	P68366	448 aa		5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	EZH2	Q15910	746 aa	Known RBP	5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	RNF220	Q5VTB9	566 aa		5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	TRIM72	Q6ZMU5	477 aa		5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	RAPGEF4	Q8WZA2	1011 aa		5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	MSLNL	Q96KJ4	702 aa		5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	METTL14	Q9HCE5	456 aa	Known RBP	5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	TRIM36	Q9NQ86	728 aa		5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	SNX14	Q9Y5W7	946 aa		5.12	□□□□□ -1.59
MATR3-223	ENST00000514402	USP19	O94966	1318 aa		5.12	□□□□□ -1.59
MATR3-223	ENST00000514402		A6NNZ2	444 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	PSMD9	O00233	223 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	TPP1	O14773	563 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	INMT	O95050	263 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	ADORA2A	P29274	412 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	CTGF	P29279	349 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	EPHA3	P29320	983 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	PRKAR1B	P31321	381 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	SUMO2	P61956	95 aa	Known RBP	5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	C4orf46	Q504U0	113 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	DENND2C	Q68D51	928 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	CCDC149	Q6ZUS6	474 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	CAND1	Q86VP6	1230 aa	Known RBP	5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	COL23A1	Q86Y22	540 aa	Predicted RBP	5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	SFTPA1	Q8IWL2	248 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	OR56A3	Q8NH54	315 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	SMCR8	Q8TEV9	937 aa	Predicted RBP	5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	IPCEF1	Q8WWN9	437 aa	Predicted RBP	5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	PPP2R3C	Q969Q6	453 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	DAZAP1	Q96EP5	407 aa	Known RBP	5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	ZNF668	Q96K58	619 aa	Predicted RBP	5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	SNX18	Q96RF0	628 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	ZCWPW1	Q9H0M4	648 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	SACM1L	Q9NTJ5	587 aa		5.11	□□□□□ -1.59
MATR3-223	ENST00000514402	STK32B	Q9NY57	414 aa		5.11	□□□□□ -1.59

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