RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 TRPM8Q7Z2W7 1104 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 HDXQ7Z353 690 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 STX12Q86Y82 276 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ANKFN1Q8N957 763 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ADAMTS16Q8TE57 1224 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 EXT2Q93063 718 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 RMDN3Q96TC7 470 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 MLPHQ9BV36 600 aaPredicted RBP7.55□□□□□ -1.2
NIPBL-208ENST00000514335 RHOBTB2Q9BYZ6 727 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 NEUROD4Q9HD90 331 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 RASSF1Q9NS23 344 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ADAMTS1Q9UHI8 967 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 CNOT7Q9UIV1 285 aaKnown RBP7.55□□□□□ -1.2
NIPBL-208ENST00000514335 RCAN3Q9UKA8 241 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 GPR34Q9UPC5 381 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 PCDHGA10Q9Y5H3 936 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 E2F8A0AVK6 867 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 SYCE1LA8MT33 242 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 B8ZZF3 427 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ATMINO43313 823 aaPredicted RBP7.55□□□□□ -1.2
NIPBL-208ENST00000514335 TXNL1O43396 289 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 NDUFA2O43678 99 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 PI15O43692 258 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ADAM11O75078 769 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 IFNB1P01574 187 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ITGB3P05106 788 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 RXRAP19793 462 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 IARSP41252 1262 aaKnown RBP7.55□□□□□ -1.2
NIPBL-208ENST00000514335 PTGER2P43116 358 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 AMPD2Q01433 879 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 SPAG1Q07617 926 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ZNF423Q2M1K9 1284 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 USP39Q53GS9 565 aaKnown RBP7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ODF2Q5BJF6 829 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ARSHQ5FYA8 562 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 OR52E8Q6IFG1 317 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 C11orf88Q6PI97 169 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 NIPA2Q8N8Q9 360 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 OR9A1PQ8NGU1 263 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ENKURQ8TC29 256 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 DENND1AQ8TEH3 1009 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 LPGAT1Q92604 370 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ADPGKQ9BRR6 497 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 CRB3Q9BUF7 120 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ZCCHC2Q9C0B9 1178 aaKnown RBP7.55□□□□□ -1.2
NIPBL-208ENST00000514335 EHD4Q9H223 541 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 RNF41Q9H4P4 317 aaPredicted RBP7.55□□□□□ -1.2
NIPBL-208ENST00000514335 INTS9Q9NV88 658 aaKnown RBP7.55□□□□□ -1.2
NIPBL-208ENST00000514335 NMRK1Q9NWW6 199 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 FBXO40Q9UH90 709 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 SRP68Q9UHB9 627 aaKnown RBP7.55□□□□□ -1.2
NIPBL-208ENST00000514335 SALL4Q9UJQ4 1053 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 CRYL1Q9Y2S2 319 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 AK9Q5TCS8 1911 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 TOGARAM1Q9Y4F4 1720 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 KRT87PA6NCN2 255 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 PSMD9O00233 223 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 PDPK1O15530 556 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 AP5Z1O43299 807 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 CNOT4O95628 575 aaKnown RBP7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ASMTLO95671 621 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 GAS8O95995 478 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 GNA11P29992 359 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 CCR1P32246 355 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 PRELPP51888 382 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 FSTL1Q12841 308 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 PDE3AQ14432 1141 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 GRM3Q14832 879 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 MEA1Q16626 185 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 DUPD1Q68J44 220 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 C12orf56Q8IXR9 622 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ZNF454Q8N9F8 522 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 OR52K1Q8NGK4 314 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 GANCQ8TET4 914 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 PTCD2Q8WV60 388 aaKnown RBP7.55□□□□□ -1.2
NIPBL-208ENST00000514335 FERMT2Q96AC1 680 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 TUBGCP3Q96CW5 907 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 ZNF668Q96K58 619 aaPredicted RBP7.55□□□□□ -1.2
NIPBL-208ENST00000514335 DEPDC7Q96QD5 511 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 RUBCNLQ9H714 662 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 MRPL47Q9HD33 250 aaKnown RBP7.55□□□□□ -1.2
NIPBL-208ENST00000514335 GRHPRQ9UBQ7 328 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 TINAGQ9UJW2 476 aa7.55□□□□□ -1.2
NIPBL-208ENST00000514335 GOLGA8OA6NCC3 632 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 GOLGA8NF8WBI6 632 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 ANXA8P13928 327 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 DSG3P32926 999 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 IRAK1P51617 712 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 RNF4P78317 190 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 SPIDRQ14159 915 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 EFTUD2Q15029 972 aaKnown RBP eCLIP7.54□□□□□ -1.2
NIPBL-208ENST00000514335 ECM1Q16610 540 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 VWA5B1Q5TIE3 1220 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 ANXA8L1Q5VT79 327 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 LRIG3Q6UXM1 1119 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 TRIM72Q6ZMU5 477 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 CATSPERGQ6ZRH7 1159 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 TXNRD3Q86VQ6 643 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 CCNJLQ8IV13 435 aa7.54□□□□□ -1.2
NIPBL-208ENST00000514335 SLC41A1Q8IVJ1 513 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms