RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 SKILP12757 684 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 BDNFP23560 247 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 BRD2P25440 801 aaKnown RBP10.74□□□□□ -0.69
NEDD9-214ENST00000513989 ADORA2BP29275 332 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 BCAT1P54687 386 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 DUSP4Q13115 394 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 SMAD4Q13485 552 aaKnown RBP10.74□□□□□ -0.69
NEDD9-214ENST00000513989 ARID5BQ14865 1188 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 TAF12Q16514 161 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 MGAT5BQ3V5L5 792 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 LIN9Q5TKA1 542 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 TAF3Q5VWG9 929 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 RSPO2Q6UXX9 243 aaPredicted RBP10.74□□□□□ -0.69
NEDD9-214ENST00000513989 RNF19BQ6ZMZ0 732 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 CCDC170Q8IYT3 715 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 ELMOD1Q8N336 334 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 EFHBQ8N7U6 833 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 TC2NQ8N9U0 490 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 ATAD1Q8NBU5 361 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 CCDC112Q8NEF3 446 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 MYLPFQ96A32 169 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 CEP295NLQ96MC4 621 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 PGLYRP2Q96PD5 576 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 TMEM209Q96SK2 561 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 BAG1Q99933 345 aaPredicted RBP10.74□□□□□ -0.69
NEDD9-214ENST00000513989 CYP4F11Q9HBI6 524 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 FAM49BQ9NUQ9 324 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 TSPAN16Q9UKR8 245 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 PCDHGC3Q9UN70 934 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 VPS13AQ96RL7 3174 aa10.74□□□□□ -0.69
NEDD9-214ENST00000513989 SSU72P8A0A1W2PR75 194 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 WDR27A2RRH5 827 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 M0QYV0 167 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 O00370 1275 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 CLDN5O00501 218 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 PER2O15055 1255 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 ADAM12O43184 909 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 TGM5O43548 720 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 HCRTO43612 131 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 CLASP2O75122 1294 aaKnown RBP10.73□□□□□ -0.69
NEDD9-214ENST00000513989 MICAL2O94851 1124 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 HAPLN1P10915 354 aaPredicted RBP10.73□□□□□ -0.69
NEDD9-214ENST00000513989 ALADP13716 330 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 CCDC130P13994 396 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 NPR3P17342 541 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 CYP2F1P24903 491 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 CYLC1P35663 651 aaPredicted RBP10.73□□□□□ -0.69
NEDD9-214ENST00000513989 ACADSBP45954 432 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 NRIP1P48552 1158 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 EPHB3P54753 998 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 BST2Q10589 180 aaKnown RBP10.73□□□□□ -0.69
NEDD9-214ENST00000513989 SPA17Q15506 151 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 GOLGA7BQ2TAP0 167 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 LILRA6Q6PI73 481 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 RBM23Q86U06 439 aaKnown RBP10.73□□□□□ -0.69
NEDD9-214ENST00000513989 NOP9Q86U38 636 aaKnown RBP10.73□□□□□ -0.69
NEDD9-214ENST00000513989 SCN4BQ8IWT1 228 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 TCEAL8Q8IYN2 117 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 FUKQ8N0W3 1084 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 SMRP1Q8NCR6 262 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 KREMEN2Q8NCW0 462 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 UBA3Q8TBC4 463 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 EPS8L1Q8TE68 723 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 STK32AQ8WU08 396 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 TFAP2BQ92481 460 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 HSFY1Q96LI6 401 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 C8orf48Q96LL4 319 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 PKMYT1Q99640 499 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 SEPT5Q99719 369 aaPredicted RBP10.73□□□□□ -0.69
NEDD9-214ENST00000513989 SYNCQ9H7C4 482 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 NHEJ1Q9H9Q4 299 aaPredicted RBP10.73□□□□□ -0.69
NEDD9-214ENST00000513989 DMAP1Q9NPF5 467 aaPredicted RBP10.73□□□□□ -0.69
NEDD9-214ENST00000513989 LUC7LQ9NQ29 371 aaKnown RBP10.73□□□□□ -0.69
NEDD9-214ENST00000513989 KRT82Q9NSB4 513 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 TMLHEQ9NVH6 421 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 MUTYHQ9UIF7 546 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 CD207Q9UJ71 328 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 NOCTQ9UK39 431 aaKnown RBP10.73□□□□□ -0.69
NEDD9-214ENST00000513989 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.73□□□□□ -0.69
NEDD9-214ENST00000513989 SLC27A5Q9Y2P5 690 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 ASB3Q9Y575 518 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 NME7Q9Y5B8 376 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 CFAP54Q96N23 3096 aa10.73□□□□□ -0.69
NEDD9-214ENST00000513989 MTMR11A4FU01 709 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 LRG1P02750 347 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 MMEP08473 750 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 GZMAP12544 262 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 EIF4A3P38919 411 aaKnown RBP10.72□□□□□ -0.69
NEDD9-214ENST00000513989 CLCN4P51793 760 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 MAP3K7CLP57077 242 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 GOLGA8FQ08AF8 430 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 GOLGA8DPQ0D2H9 430 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 KCNC3Q14003 757 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 VEPH1Q14D04 833 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 DUSP6Q16828 381 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 C10orf76Q5T2E6 689 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 HFE2Q6ZVN8 426 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 ZNF571Q7Z3V5 609 aaPredicted RBP10.72□□□□□ -0.69
NEDD9-214ENST00000513989 ITIH5Q86UX2 942 aa10.72□□□□□ -0.69
NEDD9-214ENST00000513989 FAM35AQ86V20 835 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms