RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 GREB1Q4ZG55 1949 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 A0A1W2PQC6 194 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 SLC38A8A6NNN8 435 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 PIK3R2O00459 728 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 XYLBO75191 536 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 PAEPP09466 180 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 HNRNPA1P09651 372 aaKnown RBP eCLIP10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 VDRP11473 427 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 CEBPBP17676 345 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 RFX1P22670 979 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 ANXA13P27216 316 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 HOXA9P31269 272 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 CLCN1P35523 988 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 CCR2P41597 374 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 MAGEA11P43364 429 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 TUFMP49411 452 aaKnown RBP10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 EPHB3P54753 998 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 ARID5AQ03989 594 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 GOLGA8FQ08AF8 430 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 GOLGA8DPQ0D2H9 430 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 PDAP1Q13442 181 aaKnown RBP10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 VEPH1Q14D04 833 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 SLC5A9Q2M3M2 681 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 LEXMQ3ZCV2 418 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 E4F1Q66K89 784 aaPredicted RBP10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 ARHGAP17Q68EM7 881 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 CES5AQ6NT32 575 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 DENND1BQ6P3S1 775 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 CACNA2D4Q7Z3S7 1137 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 TMC8Q8IU68 726 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 FAM71AQ8IYT1 594 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 CMASQ8NFW8 434 aaPredicted RBP10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 SLC20A1Q8WUM9 679 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 SPAG5Q96R06 1193 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 HNRNPABQ99729 332 aaKnown RBP10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 TTYH3Q9C0H2 523 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 DMAP1Q9NPF5 467 aaPredicted RBP10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 CNTN6Q9UQ52 1028 aa10.38□□□□□ -0.75
TOPBP1-209ENST00000513818 TCF20Q9UGU0 1960 aaKnown RBP10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 CLUHO75153 1309 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 LRRC53A6NM62 1247 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 CBFA2T2O43439 604 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 TADA3O75528 432 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 C1RP00736 705 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 RHOP08100 348 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 HMGA1P17096 107 aaKnown RBP10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 NPR3P17342 541 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 SOX5P35711 763 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 RGS7P49802 495 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 SLC5A3P53794 718 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 RPL10AP62906 217 aaKnown RBP10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 CYP4F8P98187 520 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 PDE4CQ08493 712 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 SMARCB1Q12824 385 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 CBX2Q14781 532 aaPredicted RBP10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 UVSSAQ2YD98 709 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 PABPC1LQ4VXU2 614 aaKnown RBP10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 STXBP5Q5T5C0 1151 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 SARM1Q6SZW1 724 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 VSTM1Q6UX27 236 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 DNAJB7Q7Z6W7 309 aaPredicted RBP10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 NOP9Q86U38 636 aaKnown RBP10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 ELMOD1Q8N336 334 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 SCAMP5Q8TAC9 235 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 ITFG1Q8TB96 612 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 CPLX3Q8WVH0 158 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 SUSD6Q92537 303 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 BAP1Q92560 729 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 SECISBP2LQ93073 1101 aaKnown RBP10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 PSMG2Q969U7 264 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 FAM81BQ96LP2 452 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 ZNF512Q96ME7 567 aaPredicted RBP10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 LRRC3Q9BY71 257 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 STK33Q9BYT3 514 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 TRIM5Q9C035 493 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 ASAH2Q9NR71 780 aa10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.37□□□□□ -0.75
TOPBP1-209ENST00000513818 VCANP13611 3396 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 ZNF638Q14966 1978 aaKnown RBP10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 A0A1W2PRU2 124 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 HHLA1C9JL84 531 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 MOSPD3O75425 235 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 GYPCP04921 128 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 TPM3P06753 285 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 CYP11B1P15538 503 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 FSHRP23945 695 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 GABRR2P28476 465 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 STAT1P42224 750 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 MLLT3P42568 568 aaPredicted RBP10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 MTHFRP42898 656 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 PDE6CP51160 858 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 ZNF75DP51815 510 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 BCAT1P54687 386 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 ITIH3Q06033 890 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 TEAD2Q15562 447 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 TAF12Q16514 161 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 ATAT1Q5SQI0 421 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 DENND5BQ6ZUT9 1274 aa10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 PDZD4Q76G19 769 aaPredicted RBP10.36□□□□□ -0.75
TOPBP1-209ENST00000513818 TMC6Q7Z403 805 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms