RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 KCNK3O14649 394 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 SIAH2O43255 324 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 TADA3O75528 432 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 B3GAT3O94766 335 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 PROSCO94903 275 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 PFKMP08237 780 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 ODC1P11926 461 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 DESP17661 470 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 COMTP21964 271 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 CETN2P41208 172 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 RAP1GAPP47736 663 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 SCNN1GP51170 649 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 RWDD2BP57060 319 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 TLE2Q04725 743 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 MESDQ14696 234 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 PPP1R26Q5T8A7 1209 aaPredicted RBP10.42□□□□□ -0.74
TPM3-221ENST00000513769 DCUN1D2Q6PH85 259 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 SCARA5Q6ZMJ2 495 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 NECAB2Q7Z6G3 386 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 ACOT1Q86TX2 421 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 ADGRF2Q8IZF7 708 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 ABI1Q8IZP0 508 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 SPATA4Q8NEY3 305 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 IPO4Q8TEX9 1081 aaKnown RBP10.42□□□□□ -0.74
TPM3-221ENST00000513769 LPPQ93052 612 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 SUSD3Q96L08 255 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 TWNKQ96RR1 684 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.42□□□□□ -0.74
TPM3-221ENST00000513769 TMEM175Q9BSA9 504 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 COLEC11Q9BWP8 271 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 DUSP16Q9BY84 665 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 MRPL9Q9BYD2 267 aaKnown RBP10.42□□□□□ -0.74
TPM3-221ENST00000513769 OSBPL7Q9BZF2 842 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 ATP13A2Q9NQ11 1180 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 HOMER3Q9NSC5 361 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 FEZ2Q9UHY8 353 aaPredicted RBP10.42□□□□□ -0.74
TPM3-221ENST00000513769 ANAPC7Q9UJX3 599 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 TMEM59LQ9UK28 342 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 TSPAN16Q9UKR8 245 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 LRFN2Q9ULH4 789 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 L1RE1Q9UN81 338 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 CEP290O15078 2479 aa10.42□□□□□ -0.74
TPM3-221ENST00000513769 BRCA2P51587 3418 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 PDCD11Q14690 1871 aaKnown RBP10.41□□□□□ -0.74
TPM3-221ENST00000513769 TARSL2A2RTX5 802 aaKnown RBP10.41□□□□□ -0.74
TPM3-221ENST00000513769 MEIS3P2A8K0S8 358 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 CFAP99D6REC4 459 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 DLL1O00548 723 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 PPEF2O14830 753 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 SYN3O14994 580 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 DDX3YO15523 660 aaKnown RBP10.41□□□□□ -0.74
TPM3-221ENST00000513769 OAZ2O95190 189 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 FTCDO95954 541 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 POMCP01189 267 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 GLI1P08151 1106 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 LMO2P25791 158 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 CTNNA1P35221 906 aaKnown RBP10.41□□□□□ -0.74
TPM3-221ENST00000513769 BCAT1P54687 386 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 BST2Q10589 180 aaKnown RBP10.41□□□□□ -0.74
TPM3-221ENST00000513769 SMARCB1Q12824 385 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 ELAVL2Q12926 359 aaKnown RBP10.41□□□□□ -0.74
TPM3-221ENST00000513769 TIGD5Q53EQ6 642 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 EFHC1Q5JVL4 640 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 DENND1BQ6P3S1 775 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 FAM171BQ6P995 826 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 MMS22LQ6ZRQ5 1243 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 RHOT1Q8IXI2 618 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 COLGALT2Q8IYK4 626 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 RCOR2Q8IZ40 523 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 B3GALNT2Q8NCR0 500 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 MYCBPAPQ8TBZ2 947 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 RUNDC3BQ96NL0 473 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 C11orf70Q9BRQ4 267 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 C11orf49Q9H6J7 331 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 SYNCQ9H7C4 482 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 TMEM39AQ9NV64 488 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 ASNSD1Q9NWL6 643 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 DDX43Q9NXZ2 648 aaKnown RBP10.41□□□□□ -0.74
TPM3-221ENST00000513769 TBX21Q9UL17 535 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 EFR3BQ9Y2G0 817 aa10.41□□□□□ -0.74
TPM3-221ENST00000513769 SCN1AP35498 2009 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 M0QYV0 167 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 XPO1O14980 1071 aaKnown RBP10.4□□□□□ -0.74
TPM3-221ENST00000513769 PSTPIP1O43586 416 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 SPOPO43791 374 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 PQBP1O60828 265 aaKnown RBP10.4□□□□□ -0.74
TPM3-221ENST00000513769 SRGAP2O75044 1071 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 RNF8O76064 485 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 ZRANB2O95218 330 aaKnown RBP eCLIP10.4□□□□□ -0.74
TPM3-221ENST00000513769 TIMP1P01033 207 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 ERBB2P04626 1255 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 PDGFRBP09619 1106 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 PLA2G4AP47712 749 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 AFF1P51825 1210 aaKnown RBP10.4□□□□□ -0.74
TPM3-221ENST00000513769 PSMC1P62191 440 aaKnown RBP10.4□□□□□ -0.74
TPM3-221ENST00000513769 SLC6A3Q01959 620 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 RNASELQ05823 741 aaKnown RBP10.4□□□□□ -0.74
TPM3-221ENST00000513769 HADHQ16836 314 aaKnown RBP10.4□□□□□ -0.74
TPM3-221ENST00000513769 ERCC6LQ2NKX8 1250 aa10.4□□□□□ -0.74
TPM3-221ENST00000513769 WSCD1Q658N2 575 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms