RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 DHCR24Q15392 516 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 ZRSR1Q15695 479 aaKnown RBP11.75□□□□□ -0.53
DDX41-216ENST00000513562 CCDC142Q17RM4 750 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 ARSHQ5FYA8 562 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 EMC10Q5UCC4 262 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 SLC36A4Q6YBV0 504 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 FILIP1Q7Z7B0 1213 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 C12orf40Q86WS4 652 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 ADGRG2Q8IZP9 1017 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 FBXO18Q8NFZ0 1043 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 MDM1Q8TC05 714 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 ADAM32Q8TC27 787 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 HNRNPLLQ8WVV9 542 aaKnown RBP11.75□□□□□ -0.53
DDX41-216ENST00000513562 FUBP3Q96I24 572 aaKnown RBP eCLIP11.75□□□□□ -0.53
DDX41-216ENST00000513562 DDX43Q9NXZ2 648 aaKnown RBP11.75□□□□□ -0.53
DDX41-216ENST00000513562 CACNA2D2Q9NY47 1150 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 ODF2LQ9ULJ1 636 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 L1RE1Q9UN81 338 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 RAXQ9Y2V3 346 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 PCDHB6Q9Y5E3 794 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 ADAMTS20P59510 1910 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 FLNBO75369 2602 aaKnown RBP11.75□□□□□ -0.53
DDX41-216ENST00000513562 CACNA1EQ15878 2313 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 ABCA7Q8IZY2 2146 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 ASCC3Q8N3C0 2202 aaKnown RBP11.74□□□□□ -0.53
DDX41-216ENST00000513562 A0A1W2PQD8 194 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 EIF4E1BA6NMX2 242 aaKnown RBP11.74□□□□□ -0.53
DDX41-216ENST00000513562 K7ENM7 598 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 APODP05090 189 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 ACAT1P24752 427 aaKnown RBP11.74□□□□□ -0.53
DDX41-216ENST00000513562 PNPLA4P41247 253 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 GRIA2P42262 883 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 ZNF131P52739 623 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 SLC7A9P82251 487 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 MYL7Q01449 175 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 POU5F1Q01860 360 aaKnown RBP11.74□□□□□ -0.53
DDX41-216ENST00000513562 ZNF33AQ06730 810 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 RESTQ13127 1097 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 GNL2Q13823 731 aaKnown RBP11.74□□□□□ -0.53
DDX41-216ENST00000513562 DTHD1Q6ZMT9 781 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 NAXDQ8IW45 347 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 PGBD3Q8N328 593 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 PHTF2Q8N3S3 785 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 DEFB119Q8N690 84 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 PNPLA1Q8N8W4 532 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 GLIS3Q8NEA6 775 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 LRIG1Q96JA1 1093 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 REEP2Q9BRK0 252 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 ZDHHC4Q9NPG8 344 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 ARHGEF4Q9NR80 690 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 CALCOCO1Q9P1Z2 691 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 DKK4Q9UBT3 224 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 GTF3C4Q9UKN8 822 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 MYO16Q9Y6X6 1858 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 PCDH15Q96QU1 1955 aa11.74□□□□□ -0.53
DDX41-216ENST00000513562 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.73□□□□□ -0.53
DDX41-216ENST00000513562 ANKRD63C9JTQ0 380 aa11.73□□□□□ -0.53
DDX41-216ENST00000513562 SLC9A3R1O14745 358 aaPredicted RBP11.73□□□□□ -0.53
DDX41-216ENST00000513562 OLFM2O95897 454 aa11.73□□□□□ -0.53
DDX41-216ENST00000513562 GABRG2P18507 467 aa11.73□□□□□ -0.53
DDX41-216ENST00000513562 MAGEA11P43364 429 aa11.73□□□□□ -0.53
DDX41-216ENST00000513562 TNFRSF4P43489 277 aa11.73□□□□□ -0.53
DDX41-216ENST00000513562 ATP2C1P98194 919 aaPredicted RBP11.73□□□□□ -0.53
DDX41-216ENST00000513562 TMEM119Q4V9L6 283 aa11.73□□□□□ -0.53
DDX41-216ENST00000513562 RHBDF2Q6PJF5 856 aa11.73□□□□□ -0.53
DDX41-216ENST00000513562 GLRX5Q86SX6 157 aa11.73□□□□□ -0.53
DDX41-216ENST00000513562 OSTM1Q86WC4 334 aa11.73□□□□□ -0.53
DDX41-216ENST00000513562 SPATA2LQ8IUW3 424 aaPredicted RBP11.73□□□□□ -0.53
DDX41-216ENST00000513562 SLC41A1Q8IVJ1 513 aa11.73□□□□□ -0.53
DDX41-216ENST00000513562 TMEM86AQ8N2M4 240 aa11.73□□□□□ -0.53
DDX41-216ENST00000513562 KCNV2Q8TDN2 545 aa11.73□□□□□ -0.53
DDX41-216ENST00000513562 SPATA17Q96L03 361 aa11.73□□□□□ -0.53
DDX41-216ENST00000513562 FIZ1Q96SL8 496 aa11.73□□□□□ -0.53
DDX41-216ENST00000513562 TNRC6BQ9UPQ9 1833 aaKnown RBP11.73□□□□□ -0.53
DDX41-216ENST00000513562 PCDHB9Q9Y5E1 797 aa11.73□□□□□ -0.53
DDX41-216ENST00000513562 STYXL1Q9Y6J8 313 aa11.73□□□□□ -0.53
DDX41-216ENST00000513562 THADAQ6YHU6 1953 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 IGHV1OR15-9A0A0B4J2B8 117 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 TISP43B9A030 160 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 HUS1O60921 280 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 CBFA2T3O75081 653 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 ADH1CP00326 375 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 ADH5P11766 374 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 POLR2BP30876 1174 aaKnown RBP11.72□□□□□ -0.53
DDX41-216ENST00000513562 ABCD1P33897 745 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 GTF2BQ00403 316 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 KDSRQ06136 332 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 ADALQ6DHV7 355 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 CRELD2Q6UXH1 353 aaPredicted RBP11.72□□□□□ -0.53
DDX41-216ENST00000513562 TOGARAM2Q6ZUX3 1019 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 TRMT11Q7Z4G4 463 aaKnown RBP11.72□□□□□ -0.53
DDX41-216ENST00000513562 NT5DC4Q86YG4 428 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 SCN4BQ8IWT1 228 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 MYCT1Q8N699 235 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 CEP295NLQ96MC4 621 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 HSPA12BQ96MM6 686 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 PLIN2Q99541 437 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 PARVGQ9HBI0 331 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 TRPM5Q9NZQ8 1165 aa11.72□□□□□ -0.53
DDX41-216ENST00000513562 AGO2Q9UKV8 859 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms