RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 MTMR12Q9C0I1 747 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 KIAA1586Q9HCI6 787 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 INTS13Q9NVM9 706 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 OBP2AQ9NY56 170 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 HSPBP1Q9NZL4 362 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 SIX4Q9UIU6 781 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 PCDHB5Q9Y5E4 795 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 DCHS1Q96JQ0 3298 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 A0A1B0GTH6 734 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 PVALEFA0A1B0GWK0 134 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 GABRDO14764 452 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 ZNF263O14978 683 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 LAMTOR5O43504 91 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 KLRC4O43908 158 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 SKILP12757 684 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 CDC25CP30307 473 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 COPS2P61201 443 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 RBP5P82980 135 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 CCZ1BP86790 482 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 CCZ1P86791 482 aaPredicted RBP10.53□□□□□ -0.72
CCL28-203ENST00000513525 MYL7Q01449 175 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 BFSP1Q12934 665 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 KMT5BQ4FZB7 885 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 ARHGAP15Q53QZ3 475 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 STXBP5Q5T5C0 1151 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 KLHL10Q6JEL2 608 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 C1orf228Q6PIY5 440 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 WDR49Q8IV35 697 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 ARID3BQ8IVW6 561 aaPredicted RBP10.53□□□□□ -0.72
CCL28-203ENST00000513525 TOP6BLQ8N6T0 577 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 ANKRD20A12PQ8NF67 263 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 NOC3LQ8WTT2 800 aaKnown RBP10.53□□□□□ -0.72
CCL28-203ENST00000513525 RSPRY1Q96DX4 576 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 DHTKD1Q96HY7 919 aaPredicted RBP10.53□□□□□ -0.72
CCL28-203ENST00000513525 PKMYT1Q99640 499 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 IER2Q9BTL4 223 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 PRR14Q9BWN1 585 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 ATXN3LQ9H3M9 355 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 ABCB6Q9NP58 842 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 DDX43Q9NXZ2 648 aaKnown RBP10.53□□□□□ -0.72
CCL28-203ENST00000513525 ABI2Q9NYB9 513 aaPredicted RBP10.53□□□□□ -0.72
CCL28-203ENST00000513525 CTNND2Q9UQB3 1225 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 PTPRJQ12913 1337 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 PSMA7O14818 248 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 TGFB1I1O43294 461 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 KRT19P08727 400 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 LHX1P48742 406 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 MYO1EQ12965 1108 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 TPD52L1Q16890 204 aaPredicted RBP10.53□□□□□ -0.72
CCL28-203ENST00000513525 BMT2Q1RMZ1 405 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 FILIP1LQ4L180 1135 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 INTS6LQ5JSJ4 861 aaKnown RBP10.53□□□□□ -0.72
CCL28-203ENST00000513525 GPR158Q5T848 1215 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 SCARA3Q6AZY7 606 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 LIMS2Q7Z4I7 341 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 CBWD2Q8IUF1 395 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 C12orf56Q8IXR9 622 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 SCFD1Q8WVM8 642 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 NELFBQ8WX92 580 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 NAP1L5Q96NT1 182 aaPredicted RBP10.53□□□□□ -0.72
CCL28-203ENST00000513525 GCNAQ96QF7 691 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 TASP1Q9H6P5 420 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 AGPAT3Q9NRZ7 376 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 SAMSN1Q9NSI8 373 aaKnown RBP10.53□□□□□ -0.72
CCL28-203ENST00000513525 EXOC1Q9NV70 894 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 TMLHEQ9NVH6 421 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 SPATA6Q9NWH7 488 aaPredicted RBP10.53□□□□□ -0.72
CCL28-203ENST00000513525 CGNQ9P2M7 1197 aaKnown RBP10.53□□□□□ -0.72
CCL28-203ENST00000513525 LIMA1Q9UHB6 759 aaKnown RBP10.53□□□□□ -0.72
CCL28-203ENST00000513525 SNX9Q9Y5X1 595 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 PIAS3Q9Y6X2 628 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 R4GN57 208 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 DMXL1Q9Y485 3027 aa10.53□□□□□ -0.72
CCL28-203ENST00000513525 LRRC10BA6NIK2 292 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 SOBPA7XYQ1 873 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 LMNAP02545 664 aaKnown RBP10.52□□□□□ -0.73
CCL28-203ENST00000513525 TNNC2P02585 160 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 CSH1P0DML2 217 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 CSH2P0DML3 217 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 HMGA1P17096 107 aaKnown RBP10.52□□□□□ -0.73
CCL28-203ENST00000513525 DDX6P26196 483 aaKnown RBP eCLIP10.52□□□□□ -0.73
CCL28-203ENST00000513525 PCSK1P29120 753 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 PRCPP42785 496 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 CYP4F8P98187 520 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 TBX2Q13207 712 aaPredicted RBP10.52□□□□□ -0.73
CCL28-203ENST00000513525 NR1I3Q14994 352 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 TAF12Q16514 161 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 SNRNP35Q16560 246 aaKnown RBP10.52□□□□□ -0.73
CCL28-203ENST00000513525 DUOXA2Q1HG44 320 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 SOWAHAQ2M3V2 549 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 CFAP221Q4G0U5 840 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 ARHGAP29Q52LW3 1261 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 LMBRD2Q68DH5 695 aaPredicted RBP10.52□□□□□ -0.73
CCL28-203ENST00000513525 SPECC1LQ69YQ0 1117 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 APTXQ7Z2E3 356 aaKnown RBP10.52□□□□□ -0.73
CCL28-203ENST00000513525 TMEM150AQ86TG1 271 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 OSTM1Q86WC4 334 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 YAF2Q8IY57 180 aa10.52□□□□□ -0.73
CCL28-203ENST00000513525 SMYD4Q8IYR2 804 aaPredicted RBP10.52□□□□□ -0.73
CCL28-203ENST00000513525 ADGRF2Q8IZF7 708 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms