RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.05□□□□□ -0.48
RNF4-218ENST00000513284 A0A0B4J269 797 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 IGHV1OR15-9A0A0B4J2B8 117 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 A0A1W2PQD8 194 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 OGTO15294 1046 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 AP5Z1O43299 807 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 XPOTO43592 962 aaKnown RBP12.04□□□□□ -0.48
RNF4-218ENST00000513284 JAK2O60674 1132 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 NFATC1O95644 943 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 GUCY2CP25092 1073 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 BYSLQ13895 437 aaKnown RBP12.04□□□□□ -0.48
RNF4-218ENST00000513284 PDIA5Q14554 519 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 HSF5Q4G112 596 aaPredicted RBP12.04□□□□□ -0.48
RNF4-218ENST00000513284 EOGTQ5NDL2 527 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 HAUS3Q68CZ6 603 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 SLC39A4Q6P5W5 647 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 FILIP1Q7Z7B0 1213 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 METTL23Q86XA0 190 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 SCUBE3Q8IX30 993 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 DCP1BQ8IZD4 617 aaKnown RBP12.04□□□□□ -0.48
RNF4-218ENST00000513284 PGBD3Q8N328 593 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 IGSF22Q8N9C0 903 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 NSUN7Q8NE18 718 aaKnown RBP12.04□□□□□ -0.48
RNF4-218ENST00000513284 KCNN1Q92952 543 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 FAM212AQ96EL1 285 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 ZNF419Q96HQ0 510 aaPredicted RBP12.04□□□□□ -0.48
RNF4-218ENST00000513284 CD93Q9NPY3 652 aa12.04□□□□□ -0.48
RNF4-218ENST00000513284 NPHP3-ACAD11A0A0J9YXS1 232 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 A0A1W2PQF6 199 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 MYMKA6NI61 221 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 TK2O00142 265 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 LEFTY2O00292 366 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 SCAMP3O14828 347 aaKnown RBP12.03□□□□□ -0.48
RNF4-218ENST00000513284 SYPP08247 313 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 ATXN1LP0C7T5 689 aaKnown RBP12.03□□□□□ -0.48
RNF4-218ENST00000513284 MAOBP27338 520 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 ITPKBP27987 946 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 MATR3P43243 847 aaKnown RBP eCLIP12.03□□□□□ -0.48
RNF4-218ENST00000513284 TNFRSF4P43489 277 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 ATP2C1P98194 919 aaPredicted RBP12.03□□□□□ -0.48
RNF4-218ENST00000513284 GUCY1B3Q02153 619 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 ME3Q16798 604 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 LMBRD2Q68DH5 695 aaPredicted RBP12.03□□□□□ -0.48
RNF4-218ENST00000513284 DBX2Q6ZNG2 339 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 MIB1Q86YT6 1006 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 ZNF843Q8N446 348 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 TRIML1Q8N9V2 468 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 BAHD1Q8TBE0 780 aaPredicted RBP12.03□□□□□ -0.48
RNF4-218ENST00000513284 SNX29Q8TEQ0 813 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 UBL7Q96S82 380 aaPredicted RBP12.03□□□□□ -0.48
RNF4-218ENST00000513284 IL21RQ9HBE5 538 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 CALCOCO1Q9P1Z2 691 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 UXTQ9UBK9 157 aaPredicted RBP12.03□□□□□ -0.48
RNF4-218ENST00000513284 GTF3C4Q9UKN8 822 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 APOBEC2Q9Y235 224 aaKnown RBP12.03□□□□□ -0.48
RNF4-218ENST00000513284 ZNF462Q96JM2 2506 aa12.03□□□□□ -0.48
RNF4-218ENST00000513284 ATMQ13315 3056 aa12.02□□□□□ -0.48
RNF4-218ENST00000513284 MGAQ8IWI9 3026 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 KPNA7A9QM74 516 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 HCRTO43612 131 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 ACAT1P24752 427 aaKnown RBP12.02□□□□□ -0.49
RNF4-218ENST00000513284 GRIA2P42262 883 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 TAF6P49848 677 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 NCKAP1LP55160 1127 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 USP46P62068 366 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 RPL10AP62906 217 aaKnown RBP12.02□□□□□ -0.49
RNF4-218ENST00000513284 BNC1Q01954 994 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 TMEM132DQ14C87 1099 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 PLEKHG6Q3KR16 790 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 ARSHQ5FYA8 562 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 ERICH6BQ5W0A0 696 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 SLC36A4Q6YBV0 504 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 OSTM1Q86WC4 334 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 PDCL2Q8N4E4 241 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 LEO1Q8WVC0 666 aaPredicted RBP12.02□□□□□ -0.49
RNF4-218ENST00000513284 HSPA12BQ96MM6 686 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 PRORYQ9H606 182 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 ARHGEF4Q9NR80 690 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 PPP4R2Q9NY27 417 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 DPP3Q9NY33 737 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 DERAQ9Y315 318 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 RAI2Q9Y5P3 530 aa12.02□□□□□ -0.49
RNF4-218ENST00000513284 GOLGA4Q13439 2230 aaKnown RBP12.01□□□□□ -0.49
RNF4-218ENST00000513284 FAM149AA5PLN7 773 aa12.01□□□□□ -0.49
RNF4-218ENST00000513284 ANKRD63C9JTQ0 380 aa12.01□□□□□ -0.49
RNF4-218ENST00000513284 TRIM24O15164 1050 aa12.01□□□□□ -0.49
RNF4-218ENST00000513284 ATXN7O15265 892 aaPredicted RBP12.01□□□□□ -0.49
RNF4-218ENST00000513284 PIGRP01833 764 aa12.01□□□□□ -0.49
RNF4-218ENST00000513284 APODP05090 189 aa12.01□□□□□ -0.49
RNF4-218ENST00000513284 EIF2DP41214 584 aaKnown RBP12.01□□□□□ -0.49
RNF4-218ENST00000513284 WASP42768 502 aa12.01□□□□□ -0.49
RNF4-218ENST00000513284 ACOT2P49753 483 aa12.01□□□□□ -0.49
RNF4-218ENST00000513284 SMTNP53814 917 aa12.01□□□□□ -0.49
RNF4-218ENST00000513284 SLC7A9P82251 487 aa12.01□□□□□ -0.49
RNF4-218ENST00000513284 ST3GAL1Q11201 340 aa12.01□□□□□ -0.49
RNF4-218ENST00000513284 GRIK2Q13002 908 aa12.01□□□□□ -0.49
RNF4-218ENST00000513284 ORC2Q13416 577 aaPredicted RBP12.01□□□□□ -0.49
RNF4-218ENST00000513284 NFE2Q16621 373 aaPredicted RBP12.01□□□□□ -0.49
RNF4-218ENST00000513284 KYAT1Q16773 422 aa12.01□□□□□ -0.49
RNF4-218ENST00000513284 RABEPKQ7Z6M1 372 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms