RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 FNIP2Q9P278 1114 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 CACNG4Q9UBN1 327 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 GDAQ9Y2T3 454 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 KIF3AQ9Y496 699 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 TECTAO75443 2155 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 ATG2AQ2TAZ0 1938 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 ZDBF2Q9HCK1 2354 aa7.54□□□□□ -1.2
RFC1-215ENST00000512881 ZFHX2Q9C0A1 2572 aaPredicted RBP7.53□□□□□ -1.2
RFC1-215ENST00000512881 CASTOR2A6NHX0 329 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 CCDC169A6NNP5 214 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 TGM5O43548 720 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 HIP1RO75146 1068 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 RFPL2O75678 378 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 PDGFBP01127 241 aaPredicted RBP7.53□□□□□ -1.2
RFC1-215ENST00000512881 RPL17P18621 184 aaKnown RBP7.53□□□□□ -1.2
RFC1-215ENST00000512881 AVPR2P30518 371 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 NPTX2P47972 431 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 VCPP55072 806 aaKnown RBP7.53□□□□□ -1.2
RFC1-215ENST00000512881 PEX3P56589 373 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 CREMQ03060 361 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 ZRSR1Q15695 479 aaKnown RBP7.53□□□□□ -1.2
RFC1-215ENST00000512881 NAB2Q15742 525 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 DCAF4L1Q3SXM0 396 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 RTP2Q5QGT7 225 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 ATF7IP2Q5U623 682 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 FAM171A1Q5VUB5 890 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 RINT1Q6NUQ1 792 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 CYP26C1Q6V0L0 522 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 CCDC149Q6ZUS6 474 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 C1orf186Q6ZWK4 172 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 APBB1IPQ7Z5R6 666 aaPredicted RBP7.53□□□□□ -1.2
RFC1-215ENST00000512881 DAW1Q8N136 415 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 PHC3Q8NDX5 983 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 PRSS33Q8NF86 280 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 HASPINQ8TF76 798 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 ZNF707Q96C28 371 aaPredicted RBP7.53□□□□□ -1.2
RFC1-215ENST00000512881 TMX3Q96JJ7 454 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 HSPA12BQ96MM6 686 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 ACO2Q99798 780 aaKnown RBP7.53□□□□□ -1.2
RFC1-215ENST00000512881 PRRX2Q99811 253 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 TTPALQ9BTX7 342 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 MMTAG2Q9BU76 263 aaKnown RBP7.53□□□□□ -1.2
RFC1-215ENST00000512881 RHOBTB2Q9BYZ6 727 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 NT5C3AQ9H0P0 336 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 SMOC2Q9H3U7 446 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 PLEKHA4Q9H4M7 779 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 WDR6Q9NNW5 1121 aaKnown RBP7.53□□□□□ -1.2
RFC1-215ENST00000512881 TNFSF13BQ9Y275 285 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 ST14Q9Y5Y6 855 aa7.53□□□□□ -1.2
RFC1-215ENST00000512881 SF3B1O75533 1304 aaKnown RBP eCLIP7.52□□□□□ -1.2
RFC1-215ENST00000512881 H3BQV1 296 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 N4BP1O75113 896 aaKnown RBP7.52□□□□□ -1.21
RFC1-215ENST00000512881 PGRP06401 933 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 C8AP07357 584 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 IGFBP6P24592 240 aaPredicted RBP7.52□□□□□ -1.21
RFC1-215ENST00000512881 GJB2P29033 226 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 MRE11P49959 708 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 RPL6Q02878 288 aaKnown RBP7.52□□□□□ -1.21
RFC1-215ENST00000512881 ELAVL2Q12926 359 aaKnown RBP7.52□□□□□ -1.21
RFC1-215ENST00000512881 DMP1Q13316 513 aaPredicted RBP7.52□□□□□ -1.21
RFC1-215ENST00000512881 TDGQ13569 410 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 TSNAXIP1Q2TAA8 658 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 RILPL1Q5EBL4 403 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 DCLRE1AQ6PJP8 1040 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 PRSS55Q6UWB4 352 aaPredicted RBP7.52□□□□□ -1.21
RFC1-215ENST00000512881 KCNK18Q7Z418 384 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 CEP57Q86XR8 500 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 LNX1Q8TBB1 728 aaPredicted RBP7.52□□□□□ -1.21
RFC1-215ENST00000512881 SMG7Q92540 1137 aaKnown RBP7.52□□□□□ -1.21
RFC1-215ENST00000512881 CRELD1Q96HD1 420 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 DRC1Q96MC2 740 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 PPP1R10Q96QC0 940 aaKnown RBP7.52□□□□□ -1.21
RFC1-215ENST00000512881 CLSTN3Q9BQT9 956 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 UPF2Q9HAU5 1272 aaKnown RBP7.52□□□□□ -1.21
RFC1-215ENST00000512881 KCNK12Q9HB15 430 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 ATP13A1Q9HD20 1204 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 PTPRHQ9HD43 1115 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 KMT5AQ9NQR1 393 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 ZDHHC7Q9NXF8 308 aa7.52□□□□□ -1.21
RFC1-215ENST00000512881 DMDP11532 3685 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 USP34Q70CQ2 3546 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 WDR81Q562E7 1941 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 SMIM28A0A1B0GU29 152 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 VWA3AA6NCI4 1184 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 H3BS24 57 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 SLC16A4O15374 487 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 ADAM12O43184 909 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 B3GAT3O94766 335 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 GUCY2CP25092 1073 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 GBP2P32456 591 aaPredicted RBP7.51□□□□□ -1.21
RFC1-215ENST00000512881 MCM2P49736 904 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 CLCNKBP51801 687 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 YARSP54577 528 aaKnown RBP7.51□□□□□ -1.21
RFC1-215ENST00000512881 OSTNP61366 133 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 ATP2C1P98194 919 aaPredicted RBP7.51□□□□□ -1.21
RFC1-215ENST00000512881 TAGLNQ01995 201 aaKnown RBP7.51□□□□□ -1.21
RFC1-215ENST00000512881 RAD51AP2Q09MP3 1159 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 TCF15Q12870 199 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 MAPK7Q13164 816 aa7.51□□□□□ -1.21
RFC1-215ENST00000512881 PSMD5Q16401 504 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms