RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 PHIPQ8WWQ0 1821 aa12.1□□□□□ -0.47
SNX25-205ENST00000512853 EME2A4GXA9 379 aaPredicted RBP12.09□□□□□ -0.47
SNX25-205ENST00000512853 SPDYE5A6NIY4 337 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 A8MXQ7 604 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 K7ERI5 159 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 FCHO1O14526 889 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 ATG7O95352 703 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 DYNLT1P63172 113 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 MXRA7P84157 204 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 ZNF200P98182 395 aaPredicted RBP12.09□□□□□ -0.47
SNX25-205ENST00000512853 ZBTB16Q05516 673 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 CDK18Q07002 472 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 AP1B1Q10567 949 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 HADHQ16836 314 aaKnown RBP12.09□□□□□ -0.47
SNX25-205ENST00000512853 CYP4A22Q5TCH4 519 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 SCARA3Q6AZY7 606 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 UNC45BQ8IWX7 931 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 TFAP2BQ92481 460 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 TMEM143Q96AN5 459 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 OXNAD1Q96HP4 312 aaPredicted RBP12.09□□□□□ -0.47
SNX25-205ENST00000512853 C10orf88Q9H8K7 445 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 CISHQ9NSE2 258 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 TAS2R1Q9NYW7 299 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 ZNF212Q9UDV6 495 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 FBXO40Q9UH90 709 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 CHMP2BQ9UQN3 213 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 DOCK1Q14185 1865 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 TCRBV9S1A1TA0A576 114 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 LRRIQ4A6NIV6 560 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 EIF4E1BA6NMX2 242 aaKnown RBP12.09□□□□□ -0.47
SNX25-205ENST00000512853 APOC4-APOC2K7ER74 178 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 VWA5AO00534 786 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 MAGEC1O60732 1142 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 APOC2P02655 101 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 C1QAP02745 245 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 ESRRAP11474 423 aaPredicted RBP12.09□□□□□ -0.47
SNX25-205ENST00000512853 NEFHP12036 1026 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 SKIP12755 728 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 BGNP21810 368 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 CCNFP41002 786 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 PSMC4P43686 418 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 SERPINB4P48594 390 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 FAAP100Q0VG06 881 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 DGKZQ13574 1117 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 KCNJ11Q14654 390 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 PTPN20Q4JDL3 420 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 TMEM154Q6P9G4 183 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 IGDCC3Q8IVU1 814 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 VPS52Q8N1B4 723 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 ARHGAP24Q8N264 748 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 JOSD2Q8TAC2 188 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 MCUR1Q96AQ8 359 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 FAM111AQ96PZ2 611 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 SH3GL3Q99963 347 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 VCXQ9H320 206 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 ZWILCHQ9H900 591 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 ALG13Q9NP73 1137 aaKnown RBP12.09□□□□□ -0.47
SNX25-205ENST00000512853 MKS1Q9NXB0 559 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 SAE1Q9UBE0 346 aaPredicted RBP12.09□□□□□ -0.47
SNX25-205ENST00000512853 PPME1Q9Y570 386 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 TEX264Q9Y6I9 313 aa12.09□□□□□ -0.47
SNX25-205ENST00000512853 SPATA31C2B4DYI2 1134 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 CAPN9O14815 690 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 MCF2LO15068 1137 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 FAM189A1O60320 539 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 PIAS1O75925 651 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 RAD17O75943 681 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 CST3P01034 146 aaPredicted RBP12.08□□□□□ -0.48
SNX25-205ENST00000512853 OATP04181 439 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 INHBAP08476 426 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 POLR2BP30876 1174 aaKnown RBP12.08□□□□□ -0.48
SNX25-205ENST00000512853 RFC1P35251 1148 aaPredicted RBP12.08□□□□□ -0.48
SNX25-205ENST00000512853 ELK3P41970 407 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 SESN3P58005 492 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 EIF3EP60228 445 aaKnown RBP12.08□□□□□ -0.48
SNX25-205ENST00000512853 MYL6P60660 151 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 DPYSL3Q14195 570 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 MEX3CQ5U5Q3 659 aaKnown RBP12.08□□□□□ -0.48
SNX25-205ENST00000512853 OR52E8Q6IFG1 317 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 DENND1BQ6P3S1 775 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 ZPBP2Q6X784 338 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 PAXIP1Q6ZW49 1069 aaPredicted RBP12.08□□□□□ -0.48
SNX25-205ENST00000512853 TRIM42Q8IWZ5 723 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 REPS2Q8NFH8 660 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 NSUN6Q8TEA1 469 aaKnown RBP12.08□□□□□ -0.48
SNX25-205ENST00000512853 WDR60Q8WVS4 1066 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 SCG3Q8WXD2 468 aaKnown RBP12.08□□□□□ -0.48
SNX25-205ENST00000512853 TTC17Q96AE7 1141 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 ATG4CQ96DT6 458 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 C7orf26Q96N11 449 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 LHX5Q9H2C1 402 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 RPAP3Q9H6T3 665 aaPredicted RBP12.08□□□□□ -0.48
SNX25-205ENST00000512853 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.08□□□□□ -0.48
SNX25-205ENST00000512853 KCNK4Q9NYG8 393 aa12.08□□□□□ -0.48
SNX25-205ENST00000512853 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.08□□□□□ -0.48
SNX25-205ENST00000512853 ANK1P16157 1881 aa12.07□□□□□ -0.48
SNX25-205ENST00000512853 ENO4A6NNW6 628 aa12.07□□□□□ -0.48
SNX25-205ENST00000512853 CAPN14A8MX76 684 aa12.07□□□□□ -0.48
SNX25-205ENST00000512853 KBTBD13C9JR72 458 aa12.07□□□□□ -0.48
SNX25-205ENST00000512853 F8W8V4 182 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms