RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 POU4F1Q01851 419 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 RUNX1T1Q06455 604 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 RCN1Q15293 331 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 PKN1Q16512 942 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 SPOCD1Q6ZMY3 1216 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 UNC45BQ8IWX7 931 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 ATP6V0D2Q8N8Y2 350 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 ZDHHC15Q96MV8 337 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 C17orf80Q9BSJ5 609 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 DEFB129Q9H1M3 183 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 SOX13Q9UN79 622 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 M0R3G1 203 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 RRM1P23921 792 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 HARS2P49590 506 aaKnown RBP12.93□□□□□ -0.34
COL11A1-210ENST00000512756 USP13Q92995 863 aaPredicted RBP12.93□□□□□ -0.34
COL11A1-210ENST00000512756 GPR63Q9BZJ6 419 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 CYP3A43Q9HB55 503 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 DDIT4Q9NX09 232 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 KANSL1LA0AUZ9 987 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 DGKIO75912 1065 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 ALBP02768 609 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 SUPT20HL2P0C7V6 817 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 UBTFL6P0CB48 400 aaPredicted RBP12.93□□□□□ -0.34
COL11A1-210ENST00000512756 CHRM3P20309 590 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 SERPINB3P29508 390 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 KCNMA1Q12791 1236 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 TWF1Q12792 350 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 ACSF2Q96CM8 615 aaPredicted RBP12.93□□□□□ -0.34
COL11A1-210ENST00000512756 PAFAH2Q99487 392 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 ATP11BQ9Y2G3 1177 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 E2F8A0AVK6 867 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 ENO4A6NNW6 628 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 WDR47O94967 919 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 ASMTLO95671 621 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 CYP24A1Q07973 514 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 TMEM62Q0P6H9 643 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 CCDC85BQ15834 202 aaPredicted RBP12.93□□□□□ -0.34
COL11A1-210ENST00000512756 BBS7Q8IWZ6 715 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 SNX31Q8N9S9 440 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 TRPC7Q9HCX4 862 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 GGA3Q9NZ52 723 aa12.93□□□□□ -0.34
COL11A1-210ENST00000512756 KIAA1210Q9ULL0 1709 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 ARP10275 920 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 PSMA4P25789 261 aaKnown RBP12.92□□□□□ -0.34
COL11A1-210ENST00000512756 DEFA1P59665 94 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 DEFA3P59666 94 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 MRPS15P82914 257 aaKnown RBP12.92□□□□□ -0.34
COL11A1-210ENST00000512756 CLEC16AQ2KHT3 1053 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 TTLL9Q3SXZ7 439 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 WDR49Q8IV35 697 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 P3H2Q8IVL5 708 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 OSGEPQ9NPF4 335 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 GPRC5CQ9NQ84 441 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 IL1RAPL1Q9NZN1 696 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 HAO1Q9UJM8 370 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 GHRP10912 638 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 ODC1P11926 461 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 PTPN7P35236 360 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 PLOD1Q02809 727 aaPredicted RBP12.92□□□□□ -0.34
COL11A1-210ENST00000512756 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
COL11A1-210ENST00000512756 HORMAD1Q86X24 394 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 SCUBE1Q8IWY4 988 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 SEPT5Q99719 369 aaPredicted RBP12.92□□□□□ -0.34
COL11A1-210ENST00000512756 MTMR12Q9C0I1 747 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 ZBTB39O15060 712 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 GLI1P08151 1106 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 FAXCQ5TGI0 409 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 TIGD7Q6NT04 549 aaPredicted RBP12.92□□□□□ -0.34
COL11A1-210ENST00000512756 TTC33Q6PID6 262 aaPredicted RBP12.92□□□□□ -0.34
COL11A1-210ENST00000512756 TRIM69Q86WT6 500 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 STX7O15400 261 aaKnown RBP12.92□□□□□ -0.34
COL11A1-210ENST00000512756 AP5Z1O43299 807 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 ATXN3P54252 364 aaPredicted RBP12.92□□□□□ -0.34
COL11A1-210ENST00000512756 ZRANB3Q5FWF4 1079 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 PCNX4Q63HM2 1172 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 LAYNQ6UX15 382 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 ECSITQ9BQ95 431 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 FAM205AQ6ZU69 1335 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 ADGRA2Q96PE1 1338 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 SLIT1O75093 1534 aa12.92□□□□□ -0.34
COL11A1-210ENST00000512756 DIP2AQ14689 1571 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 KLRK1P26718 216 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 CPT1AP50416 773 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 LRRC74AQ0VAA2 488 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 MGAT5BQ3V5L5 792 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 TJAP1Q5JTD0 557 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 AARS2Q5JTZ9 985 aaKnown RBP12.91□□□□□ -0.34
COL11A1-210ENST00000512756 DENND5BQ6ZUT9 1274 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 TAS1R2Q8TE23 839 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 ANKRD27Q96NW4 1050 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 RTFDC1Q9BY42 306 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-210ENST00000512756 PCDH9Q9HC56 1237 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 FBXO28Q9NVF7 368 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 SHOC2Q9UQ13 582 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 DRG1Q9Y295 367 aaKnown RBP12.91□□□□□ -0.34
COL11A1-210ENST00000512756 SLC26A2P50443 739 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 BCAT1P54687 386 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 SELENONQ9NZV5 590 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 MPP6Q9NZW5 540 aa12.91□□□□□ -0.34
COL11A1-210ENST00000512756 TAGLN3Q9UI15 199 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms