RNA–Protein interactions for RNA: ENST00000512372.5

NR1I3-232, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-232ENST00000512372 TCTN1Q2MV58 587 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 GLE1Q53GS7 698 aaKnown RBP9.55□□□□□ -0.88
NR1I3-232ENST00000512372 MDH1BQ5I0G3 518 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 RAB41Q5JT25 222 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 PMF1Q6P1K2 205 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 OLFML1Q6UWY5 402 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 VSTM1Q6UX27 236 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 RSRC2Q7L4I2 434 aaKnown RBP9.55□□□□□ -0.88
NR1I3-232ENST00000512372 DEFB128Q7Z7B8 93 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 RHOT1Q8IXI2 618 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 KATNAL2Q8IYT4 538 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 RNF168Q8IYW5 571 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-232ENST00000512372 TMEM130Q8N3G9 435 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 RABGGTAQ92696 567 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 MCEEQ96PE7 176 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 RTP3Q9BQQ7 232 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.55□□□□□ -0.88
NR1I3-232ENST00000512372 HTATIP2Q9BUP3 242 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 ZCWPW1Q9H0M4 648 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 MTIF3Q9H2K0 278 aaKnown RBP9.55□□□□□ -0.88
NR1I3-232ENST00000512372 DMAP1Q9NPF5 467 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-232ENST00000512372 CRTAC1Q9NQ79 661 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 CNGB3Q9NQW8 809 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 DDX56Q9NY93 547 aaKnown RBP9.55□□□□□ -0.88
NR1I3-232ENST00000512372 TMEM59LQ9UK28 342 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 MAFFQ9ULX9 164 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 EFR3BQ9Y2G0 817 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 CENPFP49454 3210 aa9.55□□□□□ -0.88
NR1I3-232ENST00000512372 C2CD4BA6NLJ0 364 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 B4GALT3O60512 393 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 HSF2BPO75031 334 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 KRT7P08729 469 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 CCDC130P13994 396 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 CSF2RAP15509 400 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 MCM3P25205 808 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 TKTP29401 623 aaKnown RBP9.54□□□□□ -0.88
NR1I3-232ENST00000512372 BRCC3P46736 316 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 SLC11A1P49279 550 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 BCAR1P56945 870 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 CREMQ03060 361 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 FPGSQ05932 587 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 FAM102AQ5T9C2 384 aaPredicted RBP9.54□□□□□ -0.88
NR1I3-232ENST00000512372 SEL1L2Q5TEA6 688 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 CCDC70Q6NSX1 233 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 FUT10Q6P4F1 479 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 CLEC20AQ6ZU45 233 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 PAQR9Q6ZVX9 377 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 DNAAF5Q86Y56 855 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 PSTKQ8IV42 348 aaKnown RBP9.54□□□□□ -0.88
NR1I3-232ENST00000512372 MMGT1Q8N4V1 131 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 GPR161Q8N6U8 529 aaKnown RBP9.54□□□□□ -0.88
NR1I3-232ENST00000512372 EXD1Q8NHP7 514 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 UBA3Q8TBC4 463 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 PHOSPHO2Q8TCD6 241 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 SPPL2BQ8TCT7 592 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 PIK3R5Q8WYR1 880 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 PCED1BQ96HM7 432 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 RBM41Q96IZ5 413 aaKnown RBP9.54□□□□□ -0.88
NR1I3-232ENST00000512372 ZNF558Q96NG5 402 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 RUNDC3BQ96NL0 473 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 TBCBQ99426 244 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 CARD6Q9BX69 1037 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 B3GNT5Q9BYG0 378 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 CWH43Q9H720 699 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 PRDM16Q9HAZ2 1276 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 AAASQ9NRG9 546 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 KRT82Q9NSB4 513 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 COMMD8Q9NX08 183 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 MARCH5Q9NX47 278 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 DNAJB4Q9UDY4 337 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 BACE2Q9Y5Z0 518 aa9.54□□□□□ -0.88
NR1I3-232ENST00000512372 COL4A4P53420 1690 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-232ENST00000512372 GOLGA6L10A0A0M3HER8 536 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 TARSL2A2RTX5 802 aaKnown RBP9.53□□□□□ -0.88
NR1I3-232ENST00000512372 TRIM66O15016 1216 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 PAPSS1O43252 624 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-232ENST00000512372 NCK2O43639 380 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 TBC1D4O60343 1298 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 AP1G2O75843 785 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 RNF8O76064 485 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 ITGB1P05556 798 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 GPD1P21695 349 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 ADORA2BP29275 332 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 RFC1P35251 1148 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-232ENST00000512372 AIF1P55008 147 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 RPL7AP62424 266 aaKnown RBP9.53□□□□□ -0.88
NR1I3-232ENST00000512372 HTRA4P83105 476 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-232ENST00000512372 USP41Q3LFD5 358 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 VARS2Q5ST30 1063 aaKnown RBP9.53□□□□□ -0.88
NR1I3-232ENST00000512372 KIAA0319Q5VV43 1072 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 PM20D1Q6GTS8 502 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 SLC8B1Q6J4K2 584 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 FAM183BPQ6ZVS7 135 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 STRADAQ7RTN6 431 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 PIGZQ86VD9 579 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 SIX6OS1Q8N1H7 587 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 OR10T2Q8NGX3 314 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 COG1Q8WTW3 980 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 TEKT4Q8WW24 435 aa9.53□□□□□ -0.88
NR1I3-232ENST00000512372 UBXN4Q92575 508 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms