RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 CYP24A1Q07973 514 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 SURF1Q15526 300 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 UAP1L1Q3KQV9 507 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 KLHDC7AQ5VTJ3 777 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 PDXDC1Q6P996 788 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 TRIM65Q6PJ69 517 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 WDR59Q6PJI9 974 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 CREBRFQ8IUR6 639 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 RNF149Q8NC42 400 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 DEFB124Q8NES8 71 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 LMO3Q8TAP4 145 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 POMGNT1Q8WZA1 660 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 FAXDC2Q96IV6 333 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 CPB2Q96IY4 423 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 ACO2Q99798 780 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 TTPALQ9BTX7 342 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 MMRN2Q9H8L6 949 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 TMEM8AQ9HCN3 771 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 SIX2Q9NPC8 291 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 KLK14Q9P0G3 267 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 ANKFY1Q9P2R3 1169 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 TNFSF13BQ9Y275 285 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 GPSM3Q9Y4H4 160 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 ZFYVE26Q68DK2 2539 aa11.21□□□□□ -0.61
PDLIM5-217ENST00000512274 ATG2BQ96BY7 2078 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 SLC38A8A6NNN8 435 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 EIF3CLB5ME19 914 aaKnown RBP11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 EPHB6O15197 1021 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 PAPSS2O95340 614 aaPredicted RBP11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 PRKCBP05771 671 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 ADRB2P07550 413 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 PTPN2P17706 415 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 AKAP5P24588 427 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 JAM2P57087 298 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 CREB5Q02930 508 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 AMHR2Q16671 573 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 KRT39Q6A163 491 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 BRSK2Q8IWQ3 736 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 CSGALNACT1Q8TDX6 532 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 PIK3R5Q8WYR1 880 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 JAKMIP2Q96AA8 810 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 ZSWIM3Q96MP5 696 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 EIF3CQ99613 913 aaKnown RBP11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 CORO1BQ9BR76 489 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 IKZF4Q9H2S9 585 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 GCNT4Q9P109 453 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 AGO2Q9UKV8 859 aaKnown RBP11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 MSRB2Q9Y3D2 182 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 PCDHGA5Q9Y5G8 931 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 ADGRG1Q9Y653 693 aa11.2□□□□□ -0.62
PDLIM5-217ENST00000512274 F5P12259 2224 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 NCANO14594 1321 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 SF3B1O75533 1304 aaKnown RBP eCLIP11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 CASTOR2A6NHX0 329 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 TISP43B9A030 160 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 OGTO15294 1046 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 CLDN3O15551 220 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 ERLIN2O94905 339 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 EDN1P05305 212 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 CCDC175P0C221 793 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 MCF2P10911 925 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 CYLC1P35663 651 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 MXI1P50539 228 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 MYL7Q01449 175 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 PON2Q15165 354 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 ASTE1Q2TB18 679 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 CBWD6Q4V339 395 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 DCAF17Q5H9S7 520 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 CBWD3Q5JTY5 395 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 CBWD5Q5RIA9 395 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 HGSNATQ68CP4 663 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 MPZL3Q6UWV2 235 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 CRELD2Q6UXH1 353 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 RAD9BQ6WBX8 426 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 CBWD2Q8IUF1 395 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 GPIHBP1Q8IV16 184 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 REXO1L1PQ8IX06 675 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 EHBP1Q8NDI1 1231 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 GSTCDQ8NEC7 633 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 ADAM32Q8TC27 787 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 PLEKHO2Q8TD55 490 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 BICD1Q96G01 975 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 ASB16Q96NS5 453 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 TARS2Q9BW92 718 aaKnown RBP11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 STK33Q9BYT3 514 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 NXF3Q9H4D5 531 aaKnown RBP11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 TRPV5Q9NQA5 729 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 FAM207AQ9NSI2 230 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 MYO1AQ9UBC5 1043 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 APEX2Q9UBZ4 518 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 PARP2Q9UGN5 583 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 PPP2R2CQ9Y2T4 447 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 NEUROG3Q9Y4Z2 214 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 EPN1Q9Y6I3 576 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 NUP205Q92621 2012 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 ZZEF1O43149 2961 aa11.19□□□□□ -0.62
PDLIM5-217ENST00000512274 LNP1A1A4G5 178 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 WDR27A2RRH5 827 aa11.18□□□□□ -0.62
PDLIM5-217ENST00000512274 LRRC53A6NM62 1247 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms