RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 SNX14Q9Y5W7 946 aa6.31□□□□□ -1.4
NUP54-209ENST00000510569 E2F8A0AVK6 867 aa6.3□□□□□ -1.4
NUP54-209ENST00000510569 AP1G1O43747 822 aa6.3□□□□□ -1.4
NUP54-209ENST00000510569 BCAR3O75815 825 aa6.3□□□□□ -1.4
NUP54-209ENST00000510569 UBXN7O94888 489 aa6.3□□□□□ -1.4
NUP54-209ENST00000510569 BMP15O95972 392 aa6.3□□□□□ -1.4
NUP54-209ENST00000510569 NCLP19338 710 aaKnown RBP6.3□□□□□ -1.4
NUP54-209ENST00000510569 KRT17Q04695 432 aa6.3□□□□□ -1.4
NUP54-209ENST00000510569 MCL1Q07820 350 aa6.3□□□□□ -1.4
NUP54-209ENST00000510569 LMBRD2Q68DH5 695 aaPredicted RBP6.3□□□□□ -1.4
NUP54-209ENST00000510569 B3GNT9Q6UX72 402 aa6.3□□□□□ -1.4
NUP54-209ENST00000510569 IZUMO1Q8IYV9 350 aa6.3□□□□□ -1.4
NUP54-209ENST00000510569 NMRK2Q9NPI5 230 aa6.3□□□□□ -1.4
NUP54-209ENST00000510569 PDGFCQ9NRA1 345 aa6.3□□□□□ -1.4
NUP54-209ENST00000510569 TRMT13Q9NUP7 481 aaKnown RBP6.3□□□□□ -1.4
NUP54-209ENST00000510569 TUBA8Q9NY65 449 aaPredicted RBP6.3□□□□□ -1.4
NUP54-209ENST00000510569 CCNL1Q9UK58 526 aaPredicted RBP6.3□□□□□ -1.4
NUP54-209ENST00000510569 FER1L4A9Z1Z3 1794 aa6.29□□□□□ -1.4
NUP54-209ENST00000510569 E5RJQ4 531 aa6.29□□□□□ -1.4
NUP54-209ENST00000510569 PPEF2O14830 753 aa6.29□□□□□ -1.4
NUP54-209ENST00000510569 ALDH1L1O75891 902 aa6.29□□□□□ -1.4
NUP54-209ENST00000510569 PDE8BO95263 885 aa6.29□□□□□ -1.4
NUP54-209ENST00000510569 CT47B1P0C2W7 299 aaPredicted RBP6.29□□□□□ -1.4
NUP54-209ENST00000510569 IBSPP21815 317 aaPredicted RBP6.29□□□□□ -1.4
NUP54-209ENST00000510569 ARHGAP25P42331 645 aa6.29□□□□□ -1.4
NUP54-209ENST00000510569 RENBPP51606 427 aa6.29□□□□□ -1.4
NUP54-209ENST00000510569 CERKLQ49MI3 558 aaPredicted RBP6.29□□□□□ -1.4
NUP54-209ENST00000510569 RNASE12Q5GAN4 147 aaKnown RBP6.29□□□□□ -1.4
NUP54-209ENST00000510569 ZNF783Q6ZMS7 281 aa6.29□□□□□ -1.4
NUP54-209ENST00000510569 CAND1Q86VP6 1230 aaKnown RBP6.29□□□□□ -1.4
NUP54-209ENST00000510569 SLC15A4Q8N697 577 aa6.29□□□□□ -1.4
NUP54-209ENST00000510569 ZBTB9Q96C00 473 aa6.29□□□□□ -1.4
NUP54-209ENST00000510569 VPS16Q9H269 839 aa6.29□□□□□ -1.4
NUP54-209ENST00000510569 KCNU1A8MYU2 1149 aa6.28□□□□□ -1.4
NUP54-209ENST00000510569 CYP2A6P11509 494 aaPredicted RBP6.28□□□□□ -1.4
NUP54-209ENST00000510569 HSPA6P17066 643 aa6.28□□□□□ -1.4
NUP54-209ENST00000510569 FPR3P25089 353 aa6.28□□□□□ -1.4
NUP54-209ENST00000510569 MMP13P45452 471 aa6.28□□□□□ -1.4
NUP54-209ENST00000510569 KRTAP10-9P60411 292 aa6.28□□□□□ -1.4
NUP54-209ENST00000510569 E2F1Q01094 437 aa6.28□□□□□ -1.4
NUP54-209ENST00000510569 TTF1Q15361 905 aaPredicted RBP6.28□□□□□ -1.4
NUP54-209ENST00000510569 L1TD1Q5T7N2 865 aaKnown RBP6.28□□□□□ -1.4
NUP54-209ENST00000510569 DAAM2Q86T65 1068 aa6.28□□□□□ -1.4
NUP54-209ENST00000510569 ZC3H10Q96K80 434 aaKnown RBP6.28□□□□□ -1.4
NUP54-209ENST00000510569 CAMKK2Q96RR4 588 aa6.28□□□□□ -1.4
NUP54-209ENST00000510569 PRR25Q96S07 402 aa6.28□□□□□ -1.4
NUP54-209ENST00000510569 TMEM79Q9BSE2 394 aa6.28□□□□□ -1.4
NUP54-209ENST00000510569 CIPCQ9C0C6 399 aa6.28□□□□□ -1.4
NUP54-209ENST00000510569 WDR17Q8IZU2 1322 aa6.27□□□□□ -1.41
NUP54-209ENST00000510569 TCRBV5S1A1TA0A578 114 aa6.27□□□□□ -1.41
NUP54-209ENST00000510569 UBE2Q2LH0YL09 131 aa6.27□□□□□ -1.41
NUP54-209ENST00000510569 EXOC3O60645 756 aa6.27□□□□□ -1.41
NUP54-209ENST00000510569 VNN1O95497 513 aa6.27□□□□□ -1.41
NUP54-209ENST00000510569 MYCLP12524 364 aaPredicted RBP6.27□□□□□ -1.41
NUP54-209ENST00000510569 AGFG1P52594 562 aaKnown RBP6.27□□□□□ -1.41
NUP54-209ENST00000510569 CTBP1Q13363 440 aa6.27□□□□□ -1.41
NUP54-209ENST00000510569 LY6KQ17RY6 165 aa6.27□□□□□ -1.41
NUP54-209ENST00000510569 KRT73Q86Y46 540 aa6.27□□□□□ -1.41
NUP54-209ENST00000510569 OR6B3Q8NGW1 331 aa6.27□□□□□ -1.41
NUP54-209ENST00000510569 SLC35G2Q8TBE7 412 aa6.27□□□□□ -1.41
NUP54-209ENST00000510569 BPIFB1Q8TDL5 484 aa6.27□□□□□ -1.41
NUP54-209ENST00000510569 NT5C1BQ96P26 610 aa6.27□□□□□ -1.41
NUP54-209ENST00000510569 TAAR9Q96RI9 348 aa6.27□□□□□ -1.41
NUP54-209ENST00000510569 DPCDQ9BVM2 203 aaPredicted RBP6.27□□□□□ -1.41
NUP54-209ENST00000510569 RTFDC1Q9BY42 306 aaPredicted RBP6.27□□□□□ -1.41
NUP54-209ENST00000510569 SPRTNQ9H040 489 aaPredicted RBP6.27□□□□□ -1.41
NUP54-209ENST00000510569 SMURF2Q9HAU4 748 aa6.27□□□□□ -1.41
NUP54-209ENST00000510569 ANLNQ9NQW6 1124 aa6.27□□□□□ -1.41
NUP54-209ENST00000510569 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.27□□□□□ -1.41
NUP54-209ENST00000510569 A0A1W2PPL8 197 aa6.26□□□□□ -1.41
NUP54-209ENST00000510569 BTN3A1O00481 513 aa6.26□□□□□ -1.41
NUP54-209ENST00000510569 EN2P19622 333 aaPredicted RBP6.26□□□□□ -1.41
NUP54-209ENST00000510569 LAMB3Q13751 1172 aa6.26□□□□□ -1.41
NUP54-209ENST00000510569 TRIP6Q15654 476 aaKnown RBP6.26□□□□□ -1.41
NUP54-209ENST00000510569 PLA1AQ53H76 456 aa6.26□□□□□ -1.41
NUP54-209ENST00000510569 CERCAMQ5T4B2 595 aa6.26□□□□□ -1.41
NUP54-209ENST00000510569 ZNF813Q6ZN06 617 aa6.26□□□□□ -1.41
NUP54-209ENST00000510569 DPY19L3Q6ZPD9 716 aa6.26□□□□□ -1.41
NUP54-209ENST00000510569 SFTPA1Q8IWL2 248 aa6.26□□□□□ -1.41
NUP54-209ENST00000510569 PPP1R35Q8TAP8 253 aa6.26□□□□□ -1.41
NUP54-209ENST00000510569 PIGOQ8TEQ8 1089 aa6.26□□□□□ -1.41
NUP54-209ENST00000510569 JPH3Q8WXH2 748 aaPredicted RBP6.26□□□□□ -1.41
NUP54-209ENST00000510569 ACO2Q99798 780 aaKnown RBP6.26□□□□□ -1.41
NUP54-209ENST00000510569 MS4A7Q9GZW8 240 aaPredicted RBP6.26□□□□□ -1.41
NUP54-209ENST00000510569 ZMAT3Q9HA38 289 aaKnown RBP6.26□□□□□ -1.41
NUP54-209ENST00000510569 ASIC5Q9NY37 505 aa6.26□□□□□ -1.41
NUP54-209ENST00000510569 ELOVL5Q9NYP7 299 aa6.26□□□□□ -1.41
NUP54-209ENST00000510569 PAXBP1Q9Y5B6 917 aa6.26□□□□□ -1.41
NUP54-209ENST00000510569 AKAP10O43572 662 aa6.25□□□□□ -1.41
NUP54-209ENST00000510569 PRKAG1P54619 331 aa6.25□□□□□ -1.41
NUP54-209ENST00000510569 ANO6Q4KMQ2 910 aa6.25□□□□□ -1.41
NUP54-209ENST00000510569 MIS18BP1Q6P0N0 1132 aa6.25□□□□□ -1.41
NUP54-209ENST00000510569 BCDIN3DQ7Z5W3 292 aaKnown RBP6.25□□□□□ -1.41
NUP54-209ENST00000510569 CNGA4Q8IV77 575 aa6.25□□□□□ -1.41
NUP54-209ENST00000510569 STAG1Q8WVM7 1258 aa6.25□□□□□ -1.41
NUP54-209ENST00000510569 MMS19Q96T76 1030 aa6.25□□□□□ -1.41
NUP54-209ENST00000510569 C17orf80Q9BSJ5 609 aa6.25□□□□□ -1.41
NUP54-209ENST00000510569 KRTAP1-5Q9BYS1 174 aa6.25□□□□□ -1.41
NUP54-209ENST00000510569 ATP6V0A4Q9HBG4 840 aa6.25□□□□□ -1.41
NUP54-209ENST00000510569 ZNF180Q9UJW8 692 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms