RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 TRPM5Q9NZQ8 1165 aa28.42■■■□□ 2.14
SNF8-208ENST00000510195 RAB23Q9ULC3 237 aa28.42■■■□□ 2.14
SNF8-208ENST00000510195 LRRIQ3A6PVS8 624 aaPredicted RBP28.41■■■□□ 2.14
SNF8-208ENST00000510195 A8MXQ7 604 aa28.41■■■□□ 2.14
SNF8-208ENST00000510195 K7ESF4 209 aa28.41■■■□□ 2.14
SNF8-208ENST00000510195 HDCP19113 662 aa28.41■■■□□ 2.14
SNF8-208ENST00000510195 BIRC3Q13489 604 aa28.41■■■□□ 2.14
SNF8-208ENST00000510195 TDRD10Q5VZ19 366 aaKnown RBP28.41■■■□□ 2.14
SNF8-208ENST00000510195 CPA6Q8N4T0 437 aa28.41■■■□□ 2.14
SNF8-208ENST00000510195 RIN3Q8TB24 985 aa28.41■■■□□ 2.14
SNF8-208ENST00000510195 PLEKHO2Q8TD55 490 aa28.41■■■□□ 2.14
SNF8-208ENST00000510195 ATP2A3Q93084 1043 aa28.41■■■□□ 2.14
SNF8-208ENST00000510195 SLC22A12Q96S37 553 aa28.41■■■□□ 2.14
SNF8-208ENST00000510195 SCAND2PQ9GZW5 306 aaPredicted RBP28.41■■■□□ 2.14
SNF8-208ENST00000510195 DUS2Q9NX74 493 aaKnown RBP28.41■■■□□ 2.14
SNF8-208ENST00000510195 NXF1Q9UBU9 619 aaKnown RBP28.41■■■□□ 2.14
SNF8-208ENST00000510195 ARHGAP26Q9UNA1 814 aa28.41■■■□□ 2.14
SNF8-208ENST00000510195 ZDHHC9Q9Y397 364 aa28.41■■■□□ 2.14
SNF8-208ENST00000510195 NME7Q9Y5B8 376 aa28.41■■■□□ 2.14
SNF8-208ENST00000510195 OTOL1A6NHN0 477 aaPredicted RBP28.4■■■□□ 2.14
SNF8-208ENST00000510195 ATG13O75143 517 aa28.4■■■□□ 2.14
SNF8-208ENST00000510195 C4BPAP04003 597 aaKnown RBP28.4■■■□□ 2.14
SNF8-208ENST00000510195 SYKP43405 635 aa28.4■■■□□ 2.14
SNF8-208ENST00000510195 ZNF699Q32M78 642 aa28.4■■■□□ 2.14
SNF8-208ENST00000510195 LONP2Q86WA8 852 aa28.4■■■□□ 2.14
SNF8-208ENST00000510195 ARL14EPQ8N8R7 260 aaPredicted RBP28.4■■■□□ 2.14
SNF8-208ENST00000510195 B3GALNT2Q8NCR0 500 aa28.4■■■□□ 2.14
SNF8-208ENST00000510195 CCDC47Q96A33 483 aaKnown RBP28.4■■■□□ 2.14
SNF8-208ENST00000510195 CEP250Q9BV73 2442 aa28.4■■■□□ 2.14
SNF8-208ENST00000510195 DNAH14Q0VDD8 3507 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 C2orf78A6NCI8 922 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 F8VP50 259 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 IKBKBO14920 756 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 RPN1P04843 607 aaKnown RBP28.39■■■□□ 2.14
SNF8-208ENST00000510195 ARSAP15289 507 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 DRD1P21728 446 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 CASP4P49662 377 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 NR1H3Q13133 447 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 NCOA4Q13772 614 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 ZNF667Q5HYK9 610 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 LAIR1Q6GTX8 287 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 TMC2Q8TDI7 906 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 CHFRQ96EP1 664 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 ECT2Q9H8V3 914 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 GMEB2Q9UKD1 530 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 TRAF3IP3Q9Y228 551 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 CACNA1AO00555 2505 aa28.39■■■□□ 2.14
SNF8-208ENST00000510195 NR3C1P04150 777 aa28.38■■■□□ 2.13
SNF8-208ENST00000510195 P4HA1P13674 534 aa28.38■■■□□ 2.13
SNF8-208ENST00000510195 IFNAR2P48551 515 aa28.38■■■□□ 2.13
SNF8-208ENST00000510195 USP46P62068 366 aa28.38■■■□□ 2.13
SNF8-208ENST00000510195 FBXO43Q4G163 708 aa28.38■■■□□ 2.13
SNF8-208ENST00000510195 FSTL4Q6MZW2 842 aa28.38■■■□□ 2.13
SNF8-208ENST00000510195 SH3RF2Q8TEC5 729 aa28.38■■■□□ 2.13
SNF8-208ENST00000510195 TAF4BQ92750 862 aa28.38■■■□□ 2.13
SNF8-208ENST00000510195 TNIP3Q96KP6 325 aa28.38■■■□□ 2.13
SNF8-208ENST00000510195 ZNF840PA6NDX5 716 aa28.37■■■□□ 2.13
SNF8-208ENST00000510195 MAPK13O15264 365 aa28.37■■■□□ 2.13
SNF8-208ENST00000510195 CALUO43852 315 aaPredicted RBP28.37■■■□□ 2.13
SNF8-208ENST00000510195 RHOBTB3O94955 611 aa28.37■■■□□ 2.13
SNF8-208ENST00000510195 GJA4P35212 333 aa28.37■■■□□ 2.13
SNF8-208ENST00000510195 SGSM1Q2NKQ1 1148 aa28.37■■■□□ 2.13
SNF8-208ENST00000510195 EML3Q32P44 896 aa28.37■■■□□ 2.13
SNF8-208ENST00000510195 RMDN1Q96DB5 314 aa28.37■■■□□ 2.13
SNF8-208ENST00000510195 SLITRK1Q96PX8 696 aa28.37■■■□□ 2.13
SNF8-208ENST00000510195 P2RY13Q9BPV8 354 aa28.37■■■□□ 2.13
SNF8-208ENST00000510195 DPEP3Q9H4B8 488 aa28.37■■■□□ 2.13
SNF8-208ENST00000510195 FRMD4BQ9Y2L6 1034 aa28.37■■■□□ 2.13
SNF8-208ENST00000510195 ATP8B3O60423 1300 aa28.37■■■□□ 2.13
SNF8-208ENST00000510195 CCDC163A0A0D9SF12 145 aa28.36■■■□□ 2.13
SNF8-208ENST00000510195 A0A1W2PQ27 194 aa28.36■■■□□ 2.13
SNF8-208ENST00000510195 A0A1W2PQ64 194 aa28.36■■■□□ 2.13
SNF8-208ENST00000510195 A0A1W2PQD8 194 aa28.36■■■□□ 2.13
SNF8-208ENST00000510195 CHURC1-FNTBB4DL54 471 aa28.36■■■□□ 2.13
SNF8-208ENST00000510195 RTN3O95197 1032 aaPredicted RBP28.36■■■□□ 2.13
SNF8-208ENST00000510195 SDHBP21912 280 aa28.36■■■□□ 2.13
SNF8-208ENST00000510195 FNTBP49356 437 aa28.36■■■□□ 2.13
SNF8-208ENST00000510195 GALK1P51570 392 aa28.36■■■□□ 2.13
SNF8-208ENST00000510195 NDUFA8P51970 172 aa28.36■■■□□ 2.13
SNF8-208ENST00000510195 SLC7A9P82251 487 aa28.36■■■□□ 2.13
SNF8-208ENST00000510195 PUM1Q14671 1186 aaKnown RBP eCLIP28.36■■■□□ 2.13
SNF8-208ENST00000510195 NFIL3Q16649 462 aa28.36■■■□□ 2.13
SNF8-208ENST00000510195 ZACNQ401N2 412 aa28.36■■■□□ 2.13
SNF8-208ENST00000510195 OVCA2Q8WZ82 227 aa28.36■■■□□ 2.13
SNF8-208ENST00000510195 B3GNT5Q9BYG0 378 aa28.36■■■□□ 2.13
SNF8-208ENST00000510195 ZNF518BQ9C0D4 1074 aa28.36■■■□□ 2.13
SNF8-208ENST00000510195 VNN1O95497 513 aa28.35■■■□□ 2.13
SNF8-208ENST00000510195 OLFM2O95897 454 aa28.35■■■□□ 2.13
SNF8-208ENST00000510195 SIM2Q14190 667 aaPredicted RBP28.35■■■□□ 2.13
SNF8-208ENST00000510195 WDR5BQ86VZ2 330 aa28.35■■■□□ 2.13
SNF8-208ENST00000510195 NUP93Q8N1F7 819 aa28.35■■■□□ 2.13
SNF8-208ENST00000510195 PDZD8Q8NEN9 1154 aa28.35■■■□□ 2.13
SNF8-208ENST00000510195 SMYD3Q9H7B4 428 aa28.35■■■□□ 2.13
SNF8-208ENST00000510195 DLL3Q9NYJ7 618 aa28.35■■■□□ 2.13
SNF8-208ENST00000510195 HRO43593 1189 aa28.34■■■□□ 2.13
SNF8-208ENST00000510195 LRP3O75074 770 aa28.34■■■□□ 2.13
SNF8-208ENST00000510195 RETP07949 1114 aa28.34■■■□□ 2.13
SNF8-208ENST00000510195 ENPEPQ07075 957 aa28.34■■■□□ 2.13
SNF8-208ENST00000510195 CCDC26Q8TAB7 109 aa28.34■■■□□ 2.13
SNF8-208ENST00000510195 C2orf42Q9NWW7 574 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms