RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 LRRC63Q05C16 580 aa19.83■□□□□ 0.77
UBE3D-207ENST00000509102 KRT39Q6A163 491 aa19.83■□□□□ 0.77
UBE3D-207ENST00000509102 FRMD5Q7Z6J6 570 aa19.83■□□□□ 0.77
UBE3D-207ENST00000509102 ELOA2Q8IYF1 753 aaPredicted RBP19.83■□□□□ 0.77
UBE3D-207ENST00000509102 EXOC4Q96A65 974 aa19.83■□□□□ 0.77
UBE3D-207ENST00000509102 SMARCD1Q96GM5 515 aa19.83■□□□□ 0.77
UBE3D-207ENST00000509102 B3GNT5Q9BYG0 378 aa19.83■□□□□ 0.77
UBE3D-207ENST00000509102 FBXO4Q9UKT5 387 aa19.83■□□□□ 0.77
UBE3D-207ENST00000509102 SPECC1L-ADORA2AF8WAN1 911 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 SLC16A3O15427 465 aaKnown RBP19.82■□□□□ 0.76
UBE3D-207ENST00000509102 TADA3O75528 432 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 HDCP19113 662 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 MXI1P50539 228 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 C1orf220Q5T0J3 134 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 TCERG1LQ5VWI1 586 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 ACOT1Q86TX2 421 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 NUP93Q8N1F7 819 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 TTC16Q8NEE8 873 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 PDZD8Q8NEN9 1154 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 SPATA20Q8TB22 786 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 LRRC3BQ96PB8 259 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 TTLL2Q9BWV7 592 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 SEMA4AQ9H3S1 761 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 CYP3A43Q9HB55 503 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 DMAP1Q9NPF5 467 aaPredicted RBP19.82■□□□□ 0.76
UBE3D-207ENST00000509102 GKN1Q9NS71 199 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 GTSE1Q9NYZ3 720 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 CCL26Q9Y258 94 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 NME7Q9Y5B8 376 aa19.82■□□□□ 0.76
UBE3D-207ENST00000509102 CLDN5O00501 218 aa19.81■□□□□ 0.76
UBE3D-207ENST00000509102 ABL1P00519 1130 aa19.81■□□□□ 0.76
UBE3D-207ENST00000509102 SP9P0CG40 484 aa19.81■□□□□ 0.76
UBE3D-207ENST00000509102 CTHP32929 405 aa19.81■□□□□ 0.76
UBE3D-207ENST00000509102 NDST1P52848 882 aa19.81■□□□□ 0.76
UBE3D-207ENST00000509102 PPP3CAQ08209 521 aa19.81■□□□□ 0.76
UBE3D-207ENST00000509102 IFRD2Q12894 506 aaPredicted RBP19.81■□□□□ 0.76
UBE3D-207ENST00000509102 PDGFRLQ15198 375 aa19.81■□□□□ 0.76
UBE3D-207ENST00000509102 WDR44Q5JSH3 913 aa19.81■□□□□ 0.76
UBE3D-207ENST00000509102 SPOPLQ6IQ16 392 aa19.81■□□□□ 0.76
UBE3D-207ENST00000509102 FAM35AQ86V20 835 aa19.81■□□□□ 0.76
UBE3D-207ENST00000509102 TTC39CQ8N584 583 aa19.81■□□□□ 0.76
UBE3D-207ENST00000509102 TTC8Q8TAM2 541 aa19.81■□□□□ 0.76
UBE3D-207ENST00000509102 TAS1R2Q8TE23 839 aa19.81■□□□□ 0.76
UBE3D-207ENST00000509102 NIF3L1Q9GZT8 377 aa19.81■□□□□ 0.76
UBE3D-207ENST00000509102 SDCBP2Q9H190 292 aa19.81■□□□□ 0.76
UBE3D-207ENST00000509102 LMAN1LQ9HAT1 526 aa19.81■□□□□ 0.76
UBE3D-207ENST00000509102 YWHAQP27348 245 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 ASPAP45381 313 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 USP46P62068 366 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 RUNX3Q13761 415 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 MTF1Q14872 753 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 ZNF528Q3MIS6 628 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 DCAF17Q5H9S7 520 aaPredicted RBP19.8■□□□□ 0.76
UBE3D-207ENST00000509102 DGKKQ5KSL6 1271 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 ADSSL1Q8N142 457 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 CRYBG2Q8N1P7 616 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 ARL14EPQ8N8R7 260 aaPredicted RBP19.8■□□□□ 0.76
UBE3D-207ENST00000509102 FBXL13Q8NEE6 735 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 ERCC4Q92889 916 aaPredicted RBP19.8■□□□□ 0.76
UBE3D-207ENST00000509102 ELMO3Q96BJ8 720 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 EEF2KMTQ96G04 330 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 DHTKD1Q96HY7 919 aaPredicted RBP19.8■□□□□ 0.76
UBE3D-207ENST00000509102 FAXDC2Q96IV6 333 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 NT5C1AQ9BXI3 368 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 CHRDQ9H2X0 955 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.8■□□□□ 0.764e-6■■■■■ 111.8
UBE3D-207ENST00000509102 KRT82Q9NSB4 513 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 COL4A3Q01955 1670 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 F5P12259 2224 aa19.8■□□□□ 0.76
UBE3D-207ENST00000509102 ZNF638Q14966 1978 aaKnown RBP19.79■□□□□ 0.76
UBE3D-207ENST00000509102 PTPRDP23468 1912 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 DENND4CQ5VZ89 1909 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 C2orf78A6NCI8 922 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 AP1G2O75843 785 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 SOX9P48436 509 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 IFNAR2P48551 515 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 CSTF1Q05048 431 aaKnown RBP19.79■□□□□ 0.76
UBE3D-207ENST00000509102 TNK2Q07912 1038 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 TAF10Q12962 218 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 CPA6Q8N4T0 437 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 OVCA2Q8WZ82 227 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 ATP2A3Q93084 1043 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 FBXO32Q969P5 355 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 CYP2S1Q96SQ9 504 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 FAM83CQ9BQN1 747 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 EBF3Q9H4W6 596 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 COMMD8Q9NX08 183 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 DUS2Q9NX74 493 aaKnown RBP19.79■□□□□ 0.76
UBE3D-207ENST00000509102 ARMCX3Q9UH62 379 aaPredicted RBP19.79■□□□□ 0.76
UBE3D-207ENST00000509102 ARHGAP26Q9UNA1 814 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 COL4A2P08572 1712 aa19.79■□□□□ 0.76
UBE3D-207ENST00000509102 OBSL1O75147 1896 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 ZFHX2Q9C0A1 2572 aaPredicted RBP19.78■□□□□ 0.76
UBE3D-207ENST00000509102 ZNF840PA6NDX5 716 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 SHISA7A6NL88 538 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 FAM200BP0CF97 657 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 CD58P19256 250 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 CCR3P51677 355 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 CACNA2D1P54289 1103 aa19.78■□□□□ 0.76
UBE3D-207ENST00000509102 INCA1Q0VD86 236 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms