RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 HERPUD2Q9BSE4 406 aa9.7□□□□□ -0.86
HTT-205ENST00000509043 FAM107BQ9H098 131 aa9.7□□□□□ -0.86
HTT-205ENST00000509043 EPB41L4BQ9H329 900 aa9.7□□□□□ -0.86
HTT-205ENST00000509043 NXF3Q9H4D5 531 aaKnown RBP9.7□□□□□ -0.86
HTT-205ENST00000509043 NMRK2Q9NPI5 230 aa9.7□□□□□ -0.86
HTT-205ENST00000509043 TUBGCP4Q9UGJ1 667 aa9.7□□□□□ -0.86
HTT-205ENST00000509043 IPPQ9Y573 584 aa9.7□□□□□ -0.86
HTT-205ENST00000509043 CFAP69A5D8W1 941 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 FAM155AB1AL88 458 aaPredicted RBP9.69□□□□□ -0.86
HTT-205ENST00000509043 E5RJQ4 531 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 PI4K2BG5E9Z4 385 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 MDM4O15151 490 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 GPR182O15218 404 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 RGS16O15492 202 aaPredicted RBP9.69□□□□□ -0.86
HTT-205ENST00000509043 SEPT4O43236 478 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 CAND2O75155 1236 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 CABYRO75952 493 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 GJB6O95452 261 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 PFKMP08237 780 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 C6orf222P0C671 652 aaPredicted RBP9.69□□□□□ -0.86
HTT-205ENST00000509043 RARBP10826 455 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 SKIP12755 728 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 TSHRP16473 764 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 ZFXP17010 805 aaPredicted RBP9.69□□□□□ -0.86
HTT-205ENST00000509043 CST5P28325 142 aaPredicted RBP9.69□□□□□ -0.86
HTT-205ENST00000509043 MIPP30301 263 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 SDC4P31431 198 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 STIP1P31948 543 aaKnown RBP9.69□□□□□ -0.86
HTT-205ENST00000509043 RPL9P32969 192 aaKnown RBP9.69□□□□□ -0.86
HTT-205ENST00000509043 MDH1P40925 334 aaKnown RBP9.69□□□□□ -0.86
HTT-205ENST00000509043 GNGT1P63211 74 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 CBLBQ13191 982 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 SLC29A2Q14542 456 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 EFHC1Q5JVL4 640 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 GNASQ5JWF2 1037 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 PPP1R26Q5T8A7 1209 aaPredicted RBP9.69□□□□□ -0.86
HTT-205ENST00000509043 IZUMO3Q5VZ72 239 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 KCTD16Q68DU8 428 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 TWF2Q6IBS0 349 aaKnown RBP9.69□□□□□ -0.86
HTT-205ENST00000509043 OLFML1Q6UWY5 402 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 FAM183BPQ6ZVS7 135 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 SLC26A9Q7LBE3 791 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 ACOT1Q86TX2 421 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 SERINC5Q86VE9 423 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 PSTKQ8IV42 348 aaKnown RBP9.69□□□□□ -0.86
HTT-205ENST00000509043 RIBC1Q8N443 379 aaPredicted RBP9.69□□□□□ -0.86
HTT-205ENST00000509043 TMEM40Q8WWA1 233 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 RXFP2Q8WXD0 754 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 MRPL45Q9BRJ2 306 aaKnown RBP9.69□□□□□ -0.86
HTT-205ENST00000509043 MAK16Q9BXY0 300 aaKnown RBP9.69□□□□□ -0.86
HTT-205ENST00000509043 FRMD8Q9BZ67 464 aaPredicted RBP9.69□□□□□ -0.86
HTT-205ENST00000509043 SEMA4AQ9H3S1 761 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 UBN1Q9NPG3 1134 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 TPX2Q9ULW0 747 aaKnown RBP9.69□□□□□ -0.86
HTT-205ENST00000509043 GIT1Q9Y2X7 761 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 SQORQ9Y6N5 450 aa9.69□□□□□ -0.86
HTT-205ENST00000509043 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.68□□□□□ -0.86
HTT-205ENST00000509043 ARHGEF37A1IGU5 675 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 RASGRF2O14827 1237 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 MCF2LO15068 1137 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 TP73O15350 636 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 CST8O60676 142 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 KRT10P13645 584 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 TGM2P21980 687 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 LHX1P48742 406 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 BEX3Q00994 111 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 NR1H3Q13133 447 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 HIC1Q14526 733 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 STAT4Q14765 748 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 P3H1Q32P28 736 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 ATP13A4Q4VNC1 1196 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 TNFAIP8L3Q5GJ75 292 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 KAZNQ674X7 775 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 LRRC31Q6UY01 552 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 ANKS1BQ7Z6G8 1248 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 FAM228AQ86W67 206 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 TTC30AQ86WT1 665 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 ADGRF2Q8IZF7 708 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 CNPY4Q8N129 248 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 ARFGAP1Q8N6T3 406 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 PCSK9Q8NBP7 692 aaKnown RBP9.68□□□□□ -0.86
HTT-205ENST00000509043 SMG8Q8ND04 991 aaKnown RBP9.68□□□□□ -0.86
HTT-205ENST00000509043 UBA3Q8TBC4 463 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 KBTBD7Q8WVZ9 684 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 C18orf25Q96B23 403 aaPredicted RBP9.68□□□□□ -0.86
HTT-205ENST00000509043 HAUS1Q96CS2 278 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 CFAP57Q96MR6 1250 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 PPP1R10Q96QC0 940 aaKnown RBP9.68□□□□□ -0.86
HTT-205ENST00000509043 HNRNPABQ99729 332 aaKnown RBP9.68□□□□□ -0.86
HTT-205ENST00000509043 ZNF670Q9BS34 389 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 EPN3Q9H201 632 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 CDC42EP4Q9H3Q1 356 aaKnown RBP9.68□□□□□ -0.86
HTT-205ENST00000509043 CENPHQ9H3R5 247 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 ZWILCHQ9H900 591 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 TMEM51Q9NW97 253 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 SLC12A6Q9UHW9 1150 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 DNPEPQ9ULA0 475 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 NOVA2Q9UNW9 492 aaKnown RBP9.68□□□□□ -0.86
HTT-205ENST00000509043 MGAMO43451 1857 aa9.68□□□□□ -0.86
HTT-205ENST00000509043 GRIN2DO15399 1336 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms