RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 POLKQ9UBT6 870 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 USP32Q8NFA0 1604 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 ABCC11Q96J66 1382 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 SHANK3Q9BYB0 1731 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 ABCC5O15440 1437 aa5.14□□□□□ -1.59
PDLIM5-211ENST00000508531 PLCH1Q4KWH8 1693 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 A0A1B0GUA9 196 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 TLDC2A0PJX2 215 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 ANKRD18BA2A2Z9 1011 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 GOLGA6L9A6NEM1 432 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 INO80B-WBP1J3KQ70 363 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 MPHOSPH10O00566 681 aaKnown RBP5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 GPR39O43194 453 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 PEX1O43933 1283 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 IGSF3O75054 1194 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 CPEP16870 476 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 PPP2R1AP30153 589 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 RARSP54136 660 aaKnown RBP5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 ATXN1P54253 815 aaKnown RBP5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 EVA1CP58658 441 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 ANAPC15P60006 121 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 ATP8B2P98198 1209 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 NHLH1Q02575 133 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 CREMQ03060 361 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 ICA1Q05084 483 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 NEDD9Q14511 834 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 PDCD2Q16342 344 aaPredicted RBP5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 CCDC158Q5M9N0 1113 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 AKNAD1Q5T1N1 836 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 CCDC30Q5VVM6 783 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 KIAA1328Q86T90 577 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 GLCCI1Q86VQ1 547 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 CHD1LQ86WJ1 897 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 CERS3Q8IU89 383 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 ANKRD18AQ8IVF6 992 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 Q8NA96 180 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 NRG4Q8WWG1 115 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 RAB24Q969Q5 203 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 NAF1Q96HR8 494 aaKnown RBP5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 MED15Q96RN5 788 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 HEPHQ9BQS7 1158 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 INO80BQ9C086 356 aaPredicted RBP5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 SLC17A6Q9P2U8 582 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 GPR45Q9Y5Y3 372 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 SPATA31A1Q5TZJ5 1347 aa5.13□□□□□ -1.59
PDLIM5-211ENST00000508531 ADGRB2O60241 1585 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 NRXN3Q9Y4C0 1643 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 ERLIN1O75477 346 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 BCAR3O75815 825 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 PNMA6AP0CW24 399 aaPredicted RBP5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 CNGA1P29973 690 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 SLC15A2Q16348 729 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 HSP90B2PQ58FF3 399 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 DNAJC21Q5F1R6 531 aaKnown RBP5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 AP1ARQ63HQ0 302 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 FBXO38Q6PIJ6 1188 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 GBP6Q6ZN66 633 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 CCDC50Q8IVM0 306 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 RHOT1Q8IXI2 618 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 PPM1NQ8N819 430 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 DCBLD1Q8N8Z6 715 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 WDR66Q8TBY9 1149 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 TMEM125Q96AQ2 219 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 PUS7Q96PZ0 661 aaKnown RBP5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 SH3GL3Q99963 347 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 C7orf25Q9BPX7 421 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 C11orf54Q9H0W9 315 aaPredicted RBP5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 SUDS3Q9H7L9 328 aaPredicted RBP5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 ARFGAP3Q9NP61 516 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 PRDM11Q9NQV5 511 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 CLIP2Q9UDT6 1046 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 ATXN2Q99700 1313 aaKnown RBP5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 POLR3AO14802 1390 aaPredicted RBP5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 PRAG1Q86YV5 1406 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 DLC1Q96QB1 1528 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 RREB1Q92766 1687 aa5.12□□□□□ -1.59
PDLIM5-211ENST00000508531 EFCAB8A8MWE9 144 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 AGXTP21549 392 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 HSD3B2P26439 372 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 SLC6A4P31645 630 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 FOLR3P41439 243 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 ERVK-21P61565 698 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 FOXF2Q12947 444 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 TRAF1Q13077 416 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 TUBB2AQ13885 445 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 CRYMQ14894 314 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 SLMAPQ14BN4 828 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 RBBP5Q15291 538 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 DACT2Q5SW24 774 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 TADA2BQ86TJ2 420 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 TCP11Q8WWU5 503 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 C16orf45Q96MC5 204 aaPredicted RBP5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 TUBB2BQ9BVA1 445 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 TLR10Q9BXR5 811 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 TEX13AQ9BXU3 409 aaPredicted RBP5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 SPATS2LQ9NUQ6 558 aaKnown RBP5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 INTUQ9ULD6 942 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 PHLPP2Q6ZVD8 1323 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 TECPR2O15040 1411 aa5.11□□□□□ -1.59
PDLIM5-211ENST00000508531 TNS3Q68CZ2 1445 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms