RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 STAT4Q14765 748 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 KNOP1Q1ED39 458 aaKnown RBP7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 FNBP1LQ5T0N5 605 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 GPR107Q5VW38 600 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 CYFIP1Q7L576 1253 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 CROCCP2Q86T23 111 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 MAPKAPK5Q8IW41 473 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 ZNF444Q8N0Y2 327 aaPredicted RBP7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 PHTF2Q8N3S3 785 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 ZNF276Q8N554 614 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 MYCT1Q8N699 235 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 COX4I2Q96KJ9 171 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 CEP63Q96MT8 703 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 PAFAH2Q99487 392 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 PI4K2AQ9BTU6 479 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 PLEKHA5Q9HAU0 1116 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 C6orf50Q9HD87 102 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 DCP1AQ9NPI6 582 aaPredicted RBP7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 PIH1D1Q9NWS0 290 aaKnown RBP7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 RABL2AQ9UBK7 228 aaPredicted RBP7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 CIDEBQ9UHD4 219 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 DDX25Q9UHL0 483 aaKnown RBP7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 PCDHA2Q9Y5H9 948 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 GPC6Q9Y625 555 aaPredicted RBP7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 RIC1Q4ADV7 1423 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 TMEM131LA2VDJ0 1609 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 SH3PXD2BA1X283 911 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 BTNL10A8MVZ5 291 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 AP3B1O00203 1094 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 NDC80O14777 642 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 MAFGO15525 162 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 DDAH1O94760 285 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 ATE1O95260 518 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 BCAP31P51572 246 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 TTBK2Q6IQ55 1244 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 NET1Q7Z628 596 aaPredicted RBP7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 ZBTB38Q8NAP3 1195 aaPredicted RBP7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 CYP2W1Q8TAV3 490 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 AK8Q96MA6 479 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 ZMAT2Q96NC0 199 aaKnown RBP7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 DCLK3Q9C098 648 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 RBM38Q9H0Z9 239 aaKnown RBP7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 RSL24D1Q9UHA3 163 aaKnown RBP7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 SCAF8Q9UPN6 1271 aaKnown RBP7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 POMPQ9Y244 141 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 TMEM2Q9UHN6 1383 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 MYH11P35749 1972 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 SGK1O00141 431 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 PSMD12O00232 456 aaPredicted RBP7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 CFHP08603 1231 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 KRT5P13647 590 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 ZNF182P17025 639 aaPredicted RBP7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 CDH3P22223 829 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 EPHA3P29320 983 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 MAPK4P31152 587 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 C21orf59P57076 290 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 UBXN2AP68543 259 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 KCNJ8Q15842 424 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 TRMT5Q32P41 509 aaKnown RBP7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 SPDYCQ5MJ68 293 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 FAXCQ5TGI0 409 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 PACS1Q6VY07 963 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 DCDC5Q6ZRR9 648 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 IGDCC3Q8IVU1 814 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 TSPAN14Q8NG11 270 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 PPP1R14CQ8TAE6 165 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 CXorf38Q8TB03 319 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 FAM110BQ8TC76 370 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 WNK4Q96J92 1243 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 MTMR9Q96QG7 549 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 HNRNPABQ99729 332 aaKnown RBP7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 GBA3Q9H227 469 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 ITM2CQ9NQX7 267 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 AASDHPPTQ9NRN7 309 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 IL1RAPL1Q9NZN1 696 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 PKD2L1Q9P0L9 805 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 CROTQ9UKG9 612 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 SPATA31D1Q6ZQQ2 1576 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 A8MXQ7 604 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 NEMP1O14524 444 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 GIPC1O14908 333 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 DCXO43602 365 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 AMHP03971 560 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 EIF2AK2P19525 551 aaKnown RBP7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 SERPINB5P36952 375 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 FMO5P49326 533 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 PCYT1AP49585 367 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 PGGT1BP53609 377 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 ADAM17P78536 824 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 TRAF2Q12933 501 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 PICALMQ13492 652 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 PALM2Q8IXS6 379 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 LILRA2Q8N149 483 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 PROM2Q8N271 834 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 PYROXD1Q8WU10 500 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 CFAP36Q96G28 342 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 PLEKHA8Q96JA3 519 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 FEM1CQ96JP0 617 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 LRGUKQ96M69 825 aa7.56□□□□□ -1.2
LIMCH1-207ENST00000508466 NSMCE3Q96MG7 304 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms