RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 KLHL29Q96CT2 875 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 FDXACB1Q9BRP7 624 aaPredicted RBP11.45□□□□□ -0.58
LIN54-207ENST00000508171 SMARCAD1Q9H4L7 1026 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 UBN1Q9NPG3 1134 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 PHTF1Q9UMS5 762 aa11.45□□□□□ -0.58
LIN54-207ENST00000508171 DNAJC25-GNG10A0A024R161 153 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 GOLGA8RI6L899 631 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 HBP1O60381 514 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 KRT16P08779 473 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 RBP3P10745 1247 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 INSRRP14616 1297 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 EIF3EP60228 445 aaKnown RBP11.44□□□□□ -0.58
LIN54-207ENST00000508171 SPARCL1Q14515 664 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 SLC10A6Q3KNW5 377 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 BBS9Q3SYG4 887 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 EFHC2Q5JST6 749 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 PCGF5Q86SE9 256 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 IGDCC3Q8IVU1 814 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 EXOC8Q8IYI6 725 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 SPATA18Q8TC71 538 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 PSMC3IPQ9P2W1 217 aaPredicted RBP11.44□□□□□ -0.58
LIN54-207ENST00000508171 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.44□□□□□ -0.58
LIN54-207ENST00000508171 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.44□□□□□ -0.58
LIN54-207ENST00000508171 CFAP73A6NFT4 308 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 A8MUI8 341 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 MAGEB2O15479 319 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 RNF8O76064 485 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 IL18RAPO95256 599 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 C22orf31O95567 290 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 VTNP04004 478 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 ARL4CP56559 192 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 BASP1P80723 227 aaKnown RBP11.44□□□□□ -0.58
LIN54-207ENST00000508171 KCTD2Q14681 263 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 CDO1Q16878 200 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 C15orf59Q2T9L4 293 aaPredicted RBP11.44□□□□□ -0.58
LIN54-207ENST00000508171 FAM102AQ5T9C2 384 aaPredicted RBP11.44□□□□□ -0.58
LIN54-207ENST00000508171 RNF43Q68DV7 783 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 GBP7Q8N8V2 638 aaPredicted RBP11.44□□□□□ -0.58
LIN54-207ENST00000508171 C12orf29Q8N999 325 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 TTC13Q8NBP0 860 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 MCRS1Q96EZ8 462 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 MMP19Q99542 508 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 KLF6Q99612 283 aaPredicted RBP11.44□□□□□ -0.58
LIN54-207ENST00000508171 SLC24A2Q9UI40 661 aa11.44□□□□□ -0.58
LIN54-207ENST00000508171 XPO7Q9UIA9 1087 aaKnown RBP11.44□□□□□ -0.58
LIN54-207ENST00000508171 ZMYND8Q9ULU4 1186 aaPredicted RBP11.44□□□□□ -0.58
LIN54-207ENST00000508171 WDR91A4D1P6 747 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 APOC4-APOC2K7ER74 178 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 APOC2P02655 101 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 CYP3A5P20815 502 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 DPYSL3Q14195 570 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 AMHR2Q16671 573 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 LVRNQ6Q4G3 990 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 CYP4V2Q6ZWL3 525 aaPredicted RBP11.43□□□□□ -0.58
LIN54-207ENST00000508171 ILDR2Q71H61 639 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 PALM2Q8IXS6 379 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 GRAMD1AQ96CP6 724 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 HPDLQ96IR7 371 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 ADPGKQ9BRR6 497 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 CXCL16Q9H2A7 254 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 WDR35Q9P2L0 1181 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 STK38LQ9Y2H1 464 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 STARD13Q9Y3M8 1113 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 CITO14578 2027 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 SCN1AP35498 2009 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 AVILO75366 819 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 SLC25A27O95847 323 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 ARF4P18085 180 aaPredicted RBP11.43□□□□□ -0.58
LIN54-207ENST00000508171 GABRB2P47870 512 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 ACVR2BQ13705 512 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 PDK4Q16654 411 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 ADGRD1Q6QNK2 874 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 ASRGL1Q7L266 308 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 LRRN4Q8WUT4 740 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 PAFAH2Q99487 392 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 PLCD4Q9BRC7 762 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 MYLK2Q9H1R3 596 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 PDZD7Q9H5P4 517 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 ARHGEF3Q9NR81 526 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.43□□□□□ -0.58
LIN54-207ENST00000508171 SMG5Q9UPR3 1016 aaKnown RBP11.43□□□□□ -0.58
LIN54-207ENST00000508171 CHMP2BQ9UQN3 213 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 L3MBTL1Q9Y468 752 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 E5RJQ4 531 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 MAP3K6O95382 1288 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 ADRA1DP25100 572 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 NDST1P52848 882 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 SLC18A1P54219 525 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 CDH6P55285 790 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 MOGSQ13724 837 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 PREPLQ4J6C6 727 aaPredicted RBP11.43□□□□□ -0.58
LIN54-207ENST00000508171 WLSQ5T9L3 541 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 HHATQ5VTY9 493 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 SULF1Q8IWU6 871 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 ATP11CQ8NB49 1132 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 LRRC8CQ8TDW0 803 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 RXFP2Q8WXD0 754 aa11.43□□□□□ -0.58
LIN54-207ENST00000508171 DCPSQ96C86 337 aaKnown RBP11.43□□□□□ -0.58
LIN54-207ENST00000508171 MPHOSPH6Q99547 160 aaKnown RBP11.43□□□□□ -0.58
LIN54-207ENST00000508171 ACSS3Q9H6R3 686 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms