RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 HSF5Q4G112 596 aaPredicted RBP14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 AP1ARQ63HQ0 302 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 CWF19L1Q69YN2 538 aaKnown RBP14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 KIAA0319LQ8IZA0 1049 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 PDIK1LQ8N165 341 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 TFAP2BQ92481 460 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 ATP6V0A1Q93050 837 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 TUBB6Q9BUF5 446 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 VCXQ9H320 206 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 ZNF395Q9H8N7 513 aaPredicted RBP14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 CNTN3Q9P232 1028 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 SCOCQ9UIL1 159 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 STYXL1Q9Y6J8 313 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 SMAPO00193 183 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 LRCH4O75427 683 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 TGDSO95455 350 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 PSMA2P25787 234 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 SERPINB4P48594 390 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 CACNA2D1P54289 1103 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 RTP1P59025 263 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 DLGAP5Q15398 846 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 TAF5Q15542 800 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 CES4AQ5XG92 561 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 PRPF39Q86UA1 669 aaKnown RBP14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 WNK4Q96J92 1243 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 CLPTM1LQ96KA5 538 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 FAM161BQ96MY7 647 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 CYTH2Q99418 400 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 FBXO40Q9UH90 709 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 STRIP2Q9ULQ0 834 aa14.04□□□□□ -0.16
SNCAIP-209ENST00000508017 LRRIQ4A6NIV6 560 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 B2RBV5 119 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 H3BRJ5 948 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 NDC80O14777 642 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 AVILO75366 819 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 ENO1P06733 434 aaKnown RBP14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 KCNA2P16389 499 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 SLC18A2Q05940 514 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 BAATQ14032 418 aaPredicted RBP14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 EMC2Q15006 297 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 BBS12Q6ZW61 710 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 NIPA2Q8N8Q9 360 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 TMEM35BQ8NCS4 154 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 RIPK3Q9Y572 518 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 IQANK1A0A1B0GTG1 560 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 MAP3K7O43318 606 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 RAD17O75943 681 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 WEE2P0C1S8 567 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 UBTFL6P0CB48 400 aaPredicted RBP14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 KDELR1P24390 212 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 TNFSF9P41273 254 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 RAB27AP51159 221 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 YWHAGP61981 247 aaKnown RBP eCLIP14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 ZNF200P98182 395 aaPredicted RBP14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 NBPF20Q3BBV1 942 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 PPP1R2P3Q6NXS1 205 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 SCARA5Q6ZMJ2 495 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 EMC1Q8N766 993 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 RDM1Q8NG50 284 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 SLC44A1Q8WWI5 657 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 DDX50Q9BQ39 737 aaKnown RBP14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 PHACTR1Q9C0D0 580 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 MMADHCQ9H3L0 296 aaPredicted RBP14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 WDR35Q9P2L0 1181 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 PCSK1NQ9UHG2 260 aa14.03□□□□□ -0.16
SNCAIP-209ENST00000508017 CCDC195A0A1B0GUA6 201 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 TTLL13PA6NNM8 815 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 RGS20O76081 388 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 ASNSP08243 561 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 INHBAP08476 426 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 EIF3EP60228 445 aaKnown RBP14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 MYL6P60660 151 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 DENND1BQ6P3S1 775 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 NPNTQ6UXI9 565 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 RFX6Q8HWS3 928 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 CCNJLQ8IV13 435 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 APLFQ8IW19 511 aaPredicted RBP14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 GALNT15Q8N3T1 639 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 CFAP61Q8NHU2 1237 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 GATA6Q92908 595 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 CISHQ9NSE2 258 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 SLC9A2Q9UBY0 812 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 CYTH4Q9UIA0 394 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 IKBKGQ9Y6K9 419 aa14.02□□□□□ -0.16
SNCAIP-209ENST00000508017 A0A0B4J269 797 aa14.02□□□□□ -0.17
SNCAIP-209ENST00000508017 WDR46O15213 610 aaKnown RBP14.02□□□□□ -0.17
SNCAIP-209ENST00000508017 STAM2O75886 525 aa14.02□□□□□ -0.17
SNCAIP-209ENST00000508017 LSM8O95777 96 aaKnown RBP14.02□□□□□ -0.17
SNCAIP-209ENST00000508017 ASS1P00966 412 aaKnown RBP14.02□□□□□ -0.17
SNCAIP-209ENST00000508017 PSAPP07602 524 aa14.02□□□□□ -0.17
SNCAIP-209ENST00000508017 NR3C2P08235 984 aa14.02□□□□□ -0.17
SNCAIP-209ENST00000508017 ROR2Q01974 943 aaKnown RBP14.02□□□□□ -0.17
SNCAIP-209ENST00000508017 DPYSL3Q14195 570 aa14.02□□□□□ -0.17
SNCAIP-209ENST00000508017 RBBP5Q15291 538 aaKnown RBP14.02□□□□□ -0.17
SNCAIP-209ENST00000508017 PTPN20Q4JDL3 420 aa14.02□□□□□ -0.17
SNCAIP-209ENST00000508017 POLNQ7Z5Q5 900 aa14.02□□□□□ -0.17
SNCAIP-209ENST00000508017 VSIG10LQ86VR7 867 aa14.02□□□□□ -0.17
SNCAIP-209ENST00000508017 PPFIBP2Q8ND30 876 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms