RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965	BTBD18	B2RXH4	712 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965		I3L4J1	428 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	MED24	O75448	989 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	TADA2A	O75478	443 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	BAG4	O95429	457 aa	Known RBP	6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	LMNA	P02545	664 aa	Known RBP	6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	XBP1	P17861	261 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	CD72	P21854	359 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	POU5F1B	Q06416	359 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	TUSC3	Q13454	348 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	SNW1	Q13573	536 aa	Known RBP	6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	PCBP1	Q15365	356 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	SLC5A9	Q2M3M2	681 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	PPM1L	Q5SGD2	360 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	LIN9	Q5TKA1	542 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	FAM171A1	Q5VUB5	890 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	RSPO2	Q6UXX9	243 aa	Predicted RBP	6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	CYP26C1	Q6V0L0	522 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	TTLL10	Q6ZVT0	673 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	ERMP1	Q7Z2K6	904 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	NOSTRIN	Q8IVI9	506 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	HACE1	Q8IYU2	909 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	C3orf58	Q8NDZ4	430 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	LNX1	Q8TBB1	728 aa	Predicted RBP	6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	HDAC7	Q8WUI4	952 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	FGF13	Q92913	245 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	GTF3C6	Q969F1	213 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	ISL2	Q96A47	359 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	NAP1L4	Q99733	375 aa	Known RBP	6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	CCDC113	Q9H0I3	377 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	TMEM60	Q9H2L4	133 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	POLD4	Q9HCU8	107 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	ABCB6	Q9NP58	842 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	ANKEF1	Q9NU02	776 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	SNTG2	Q9NY99	539 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	DPP7	Q9UHL4	492 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	CDH7	Q9ULB5	785 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	PCDHA12	Q9UN75	941 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	SIT1	Q9Y3P8	196 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	FAM186A	A6NE01	2351 aa		6.1	□□□□□ -1.43
ATXN3-210	ENST00000507965	GVINP1	Q7Z2Y8	2422 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	ZNF292	O60281	2723 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	CACNA1I	Q9P0X4	2223 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	TMEM238L	A0A1B0GVL6	79 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	CPNE3	O75131	537 aa	Known RBP	6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	PRKCB	P05771	671 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	ATP2B1	P20020	1258 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	TKT	P29401	623 aa	Known RBP	6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	MCM7	P33993	719 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	OR1D2	P34982	312 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	BUD31	P41223	144 aa	Predicted RBP	6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	BRCC3	P46736	316 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	CLCNKB	P51801	687 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	STARD6	P59095	220 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	GUCY1B3	Q02153	619 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	CREM	Q03060	361 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	NCBP1	Q09161	790 aa	Known RBP	6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	PRPF4B	Q13523	1007 aa	Known RBP	6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	UBXN2B	Q14CS0	331 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	MLF2	Q15773	248 aa	Predicted RBP	6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	ME3	Q16798	604 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	TSSK4	Q6SA08	328 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	CD300LG	Q6UXG3	332 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	CATSPER3	Q86XQ3	398 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	C1orf210	Q8IVY1	113 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	SPACA3	Q8IXA5	215 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	DIS3L2	Q8IYB7	885 aa	Known RBP	6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	SUMF1	Q8NBK3	374 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	FBXO15	Q8NCQ5	510 aa	Predicted RBP	6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	NSUN7	Q8NE18	718 aa	Known RBP	6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	MTMR9	Q96QG7	549 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	TTPAL	Q9BTX7	342 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	DDX23	Q9BUQ8	820 aa	Known RBP	6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	PLA2G2F	Q9BZM2	168 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	FZD8	Q9H461	694 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	PRMT7	Q9NVM4	692 aa	Predicted RBP	6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	DNMT3B	Q9UBC3	853 aa	Known RBP	6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	GDA	Q9Y2T3	454 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	CDY1	Q9Y6F8	540 aa		6.09	□□□□□ -1.43
ATXN3-210	ENST00000507965	HELZ	P42694	1942 aa	Known RBP	6.09	□□□□□ -1.44
ATXN3-210	ENST00000507965	CACNA1A	O00555	2505 aa		6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	KANSL1L	A0AUZ9	987 aa		6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	SHISA7	A6NL88	538 aa		6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	N4BP3	O15049	544 aa		6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	MEFV	O15553	781 aa	Predicted RBP	6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	EPB41L2	O43491	1005 aa	Known RBP	6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	GADD45B	O75293	160 aa	Predicted RBP	6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	TH	P07101	528 aa		6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	HNRNPA1	P09651	372 aa	Known RBP eCLIP	6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	CEBPB	P17676	345 aa		6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	FCAR	P24071	287 aa		6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	HOXA9	P31269	272 aa		6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	PPP2R3A	Q06190	1150 aa		6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	GRM2	Q14416	872 aa		6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	FAM187B	Q17R55	369 aa		6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	PABPC1L	Q4VXU2	614 aa	Known RBP	6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	AXDND1	Q5T1B0	1012 aa	Predicted RBP	6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	ZC3H14	Q6PJT7	736 aa	Known RBP	6.08	□□□□□ -1.44
ATXN3-210	ENST00000507965	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	6.08	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms