RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 MYCBPAPQ8TBZ2 947 aa12.32□□□□□ -0.44
HMGCS1-204ENST00000507293 NETO1Q8TDF5 533 aa12.32□□□□□ -0.44
HMGCS1-204ENST00000507293 GAB3Q8WWW8 586 aa12.32□□□□□ -0.44
HMGCS1-204ENST00000507293 EZH1Q92800 747 aaPredicted RBP12.32□□□□□ -0.44
HMGCS1-204ENST00000507293 CD101Q93033 1021 aa12.32□□□□□ -0.44
HMGCS1-204ENST00000507293 SNX21Q969T3 373 aa12.32□□□□□ -0.44
HMGCS1-204ENST00000507293 EXOC4Q96A65 974 aa12.32□□□□□ -0.44
HMGCS1-204ENST00000507293 HHIPQ96QV1 700 aa12.32□□□□□ -0.44
HMGCS1-204ENST00000507293 DPEP3Q9H4B8 488 aa12.32□□□□□ -0.44
HMGCS1-204ENST00000507293 SLC39A2Q9NP94 309 aa12.32□□□□□ -0.44
HMGCS1-204ENST00000507293 TRPM5Q9NZQ8 1165 aa12.32□□□□□ -0.44
HMGCS1-204ENST00000507293 ARHGAP26Q9UNA1 814 aa12.32□□□□□ -0.44
HMGCS1-204ENST00000507293 WDR87Q6ZQQ6 2873 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 F8VP50 259 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 TACC1O75410 805 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 RPP40O75818 363 aaKnown RBP12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 F13A1P00488 732 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 CCDC192P0DO97 292 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 ZSCAN22P10073 491 aaPredicted RBP12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 TCF3P15923 654 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 GNL1P36915 607 aaPredicted RBP12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 AFMP43652 599 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 PDE6CP51160 858 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 CACNA2D1P54289 1103 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 SNRPFP62306 86 aaKnown RBP12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 CUL4BQ13620 913 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 BMT2Q1RMZ1 405 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 WDR72Q3MJ13 1102 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 FBXO43Q4G163 708 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 C12orf56Q8IXR9 622 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 GRAMD1CQ8IYS0 662 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 RPLP0P6Q8NHW5 317 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 ZNF516Q92618 1163 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 CEP295NLQ96MC4 621 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 TTLL2Q9BWV7 592 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 GZF1Q9H116 711 aaPredicted RBP12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 FAM13BQ9NYF5 915 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 PCDHA7Q9UN72 937 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 MYOFQ9NZM1 2061 aa12.31□□□□□ -0.44
HMGCS1-204ENST00000507293 CCDC163A0A0D9SF12 145 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 PVALEFA0A1B0GWK0 134 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 LEFTY2O00292 366 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 SLC30A4O14863 429 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 AXIN1O15169 862 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 GDF9O60383 454 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 EXOC3O60645 756 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 STAU1O95793 577 aaKnown RBP12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 PFKLP17858 780 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 PTPN1P18031 435 aaKnown RBP12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 ME1P48163 572 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 CASP4P49662 377 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 MYL6P60660 151 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 NOP14P78316 857 aaKnown RBP12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 ZXDBP98169 803 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 NR1H3Q13133 447 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 PSMD2Q13200 908 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 TRPC3Q13507 836 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 CCDC6Q16204 474 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 RESP18Q5W5W9 173 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 CACNA2D4Q7Z3S7 1137 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 KBTBD6Q86V97 674 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 HSCBQ8IWL3 235 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 SYAP1Q96A49 352 aaPredicted RBP12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 C8orf48Q96LL4 319 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 ZNF518BQ9C0D4 1074 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 ELOVL4Q9GZR5 314 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 XYLT2Q9H1B5 865 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 ARRDC1-AS1Q9H2J1 176 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 LINC00597Q9H2U6 94 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 TMEM30AQ9NV96 361 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 EHD2Q9NZN4 543 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 CGNQ9P2M7 1197 aaKnown RBP12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 NXF1Q9UBU9 619 aaKnown RBP12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 FRYLO94915 3013 aa12.3□□□□□ -0.44
HMGCS1-204ENST00000507293 NUP205Q92621 2012 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 ZNF840PA6NDX5 716 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 A8MXQ7 604 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 CLDN5O00501 218 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 PHACTR2O75167 634 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 AKAP3O75969 853 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 CLSTN1O94985 981 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 EPN2O95208 641 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 NFATC1O95644 943 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 OLFM2O95897 454 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 ABL1P00519 1130 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 HSP90AA1P07900 732 aaKnown RBP12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 FAM163BP0C2L3 166 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 OPRD1P41143 372 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 SLC7A9P82251 487 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 IFRD2Q12894 506 aaPredicted RBP12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 TAF10Q12962 218 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 BIRC3Q13489 604 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 PKP1Q13835 747 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 DMC1Q14565 340 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 KNOP1Q1ED39 458 aaKnown RBP12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 SYT13Q7L8C5 426 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 CAMKK1Q8N5S9 505 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 B3GALNT2Q8NCR0 500 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 PLEKHO2Q8TD55 490 aa12.29□□□□□ -0.44
HMGCS1-204ENST00000507293 ACDQ96AP0 544 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms