RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ZFRQ96KR1 1074 aaKnown RBP7.82□□□□□ -1.16
VCAN-207ENST00000507162 TCHPQ9BT92 498 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.82□□□□□ -1.16
VCAN-207ENST00000507162 GPR174Q9BXC1 333 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 C22orf23Q9BZE7 217 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 SLC6A17Q9H1V8 727 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 CD93Q9NPY3 652 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 PCDHB13Q9Y5F0 798 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 MYO16Q9Y6X6 1858 aa7.82□□□□□ -1.16
VCAN-207ENST00000507162 SETD2Q9BYW2 2564 aaPredicted RBP7.81□□□□□ -1.16
VCAN-207ENST00000507162 NBPF19A0A087WUL8 3843 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 CBX4O00257 560 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 SCAMP3O14828 347 aaKnown RBP7.81□□□□□ -1.16
VCAN-207ENST00000507162 SLC27A2O14975 620 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 TRIM66O15016 1216 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 HAPLN1P10915 354 aaPredicted RBP7.81□□□□□ -1.16
VCAN-207ENST00000507162 HARSP12081 509 aaKnown RBP7.81□□□□□ -1.16
VCAN-207ENST00000507162 NCAM1P13591 858 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 HMGA1P17096 107 aaKnown RBP7.81□□□□□ -1.16
VCAN-207ENST00000507162 HDCP19113 662 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 NDUFV2P19404 249 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 CR2P20023 1033 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 CHMLP26374 656 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 GRIA2P42262 883 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 GPR15P49685 360 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 RARRES1P49788 294 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 IL9RQ01113 521 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 SPAG1Q07617 926 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 RESTQ13127 1097 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 DNAJC3Q13217 504 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 DHCR24Q15392 516 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 DCAF12L1Q5VU92 463 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 SDE2Q6IQ49 451 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 ADGRG2Q8IZP9 1017 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 NAT16Q8N8M0 369 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 DNASE2BQ8WZ79 361 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 TSC1Q92574 1164 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 TOE1Q96GM8 510 aaKnown RBP7.81□□□□□ -1.16
VCAN-207ENST00000507162 DRC1Q96MC2 740 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 EIF2AK1Q9BQI3 630 aaKnown RBP7.81□□□□□ -1.16
VCAN-207ENST00000507162 KIFC3Q9BVG8 833 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 SLC26A6Q9BXS9 759 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 TTC12Q9H892 705 aaPredicted RBP7.81□□□□□ -1.16
VCAN-207ENST00000507162 ABI2Q9NYB9 513 aaPredicted RBP7.81□□□□□ -1.16
VCAN-207ENST00000507162 HSFX1Q9UBD0 423 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 TUBGCP4Q9UGJ1 667 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 EIF2B4Q9UI10 523 aaKnown RBP7.81□□□□□ -1.16
VCAN-207ENST00000507162 SNX11Q9Y5W9 270 aa7.81□□□□□ -1.16
VCAN-207ENST00000507162 RELNP78509 3460 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 ICE1Q9Y2F5 2266 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 A0A0A0MRY4 1105 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 CCDC196A0A1B0GTZ2 297 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 ANO9A1A5B4 782 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 K7ERI5 159 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 ENC1O14682 589 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 SGSM2O43147 1006 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 RFPL3O75679 317 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 LDOC1O95751 146 aaPredicted RBP7.8□□□□□ -1.16
VCAN-207ENST00000507162 AFPP02771 609 aaKnown RBP7.8□□□□□ -1.16
VCAN-207ENST00000507162 CYP17A1P05093 508 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 CSH1P0DML2 217 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 CSH2P0DML3 217 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 CD6P30203 668 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 NTSR1P30989 418 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 PCBP4P57723 403 aaKnown RBP7.8□□□□□ -1.16
VCAN-207ENST00000507162 ATP2C1P98194 919 aaPredicted RBP7.8□□□□□ -1.16
VCAN-207ENST00000507162 USP4Q13107 963 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 KIF19Q2TAC6 998 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 ZNF568Q3ZCX4 644 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 MOXD1Q6UVY6 613 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 TRMT11Q7Z4G4 463 aaKnown RBP7.8□□□□□ -1.16
VCAN-207ENST00000507162 FILIP1Q7Z7B0 1213 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 C12orf40Q86WS4 652 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 DHX40Q8IX18 779 aaKnown RBP7.8□□□□□ -1.16
VCAN-207ENST00000507162 EXD3Q8N9H8 876 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 MCPH1Q8NEM0 835 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 IPO4Q8TEX9 1081 aaKnown RBP7.8□□□□□ -1.16
VCAN-207ENST00000507162 SNX19Q92543 992 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 HAS1Q92839 578 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 RNF166Q96A37 237 aaPredicted RBP7.8□□□□□ -1.16
VCAN-207ENST00000507162 CCDC113Q9H0I3 377 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 CDT1Q9H211 546 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 TMEM206Q9H813 350 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 KCNMB3Q9NPA1 279 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 WDR70Q9NW82 654 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 PCDHA4Q9UN74 947 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 PCDHGA1Q9Y5H4 931 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 NID2Q14112 1375 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 MYOFQ9NZM1 2061 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 ARID2Q68CP9 1835 aa7.8□□□□□ -1.16
VCAN-207ENST00000507162 A0A1W2PQF6 199 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 C2orf78A6NCI8 922 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 CCNT1O60563 726 aaKnown RBP7.79□□□□□ -1.16
VCAN-207ENST00000507162 PRPF40AO75400 957 aaKnown RBP7.79□□□□□ -1.16
VCAN-207ENST00000507162 LYPLA2O95372 231 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 BAG4O95429 457 aaKnown RBP7.79□□□□□ -1.16
VCAN-207ENST00000507162 CHRM1P11229 460 aaPredicted RBP7.79□□□□□ -1.16
VCAN-207ENST00000507162 TYMPP19971 482 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 GLDCP23378 1020 aa7.79□□□□□ -1.16
VCAN-207ENST00000507162 CCT8P50990 548 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms