RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 C2CD6Q53TS8 623 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 MFSD5Q6N075 450 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 FAM131BQ86XD5 332 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 MFN1Q8IWA4 741 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 NUP93Q8N1F7 819 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 SPPL2BQ8TCT7 592 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 AGAP3Q96P47 875 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 MIR1-1HGQ9H1L0 117 aa9.87□□□□□ -0.83
NEK1-203ENST00000507142 CACYBPQ9HB71 228 aaKnown RBP9.87□□□□□ -0.83
NEK1-203ENST00000507142 MICAL2O94851 1124 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 MXRA7P84157 204 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 ATP11CQ8NB49 1132 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 B3GALNT2Q8NCR0 500 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 POF1BQ8WVV4 589 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 BSNDQ8WZ55 320 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 AP1M1Q9BXS5 423 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 ULBP1Q9BZM6 244 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 CLK2P49760 499 aaKnown RBP9.86□□□□□ -0.83
NEK1-203ENST00000507142 RAB44Q7Z6P3 723 aaPredicted RBP9.86□□□□□ -0.83
NEK1-203ENST00000507142 UNC93AQ86WB7 457 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 CPA6Q8N4T0 437 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 DCLK2Q8N568 766 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 FEZF2Q8TBJ5 459 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 CASP10Q92851 521 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 GPR63Q9BZJ6 419 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 UBA6A0AVT1 1052 aaPredicted RBP9.86□□□□□ -0.83
NEK1-203ENST00000507142 NRP1O14786 923 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 ALDH1A2O94788 518 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 MMEP08473 750 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 INHBAP08476 426 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 SLC1A1P43005 524 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 SMARCB1Q12824 385 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 ECM1Q16610 540 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 DSG4Q86SJ6 1040 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 ADAM32Q8TC27 787 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 TBC1D13Q9NVG8 400 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 UVRAGQ9P2Y5 699 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 AFF4Q9UHB7 1163 aaKnown RBP9.86□□□□□ -0.83
NEK1-203ENST00000507142 CAPN11Q9UMQ6 739 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 ABCA3Q99758 1704 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 FGF18O76093 207 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 RARGP13631 454 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 CASP5P51878 434 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 SGCGQ13326 291 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 DNAJC21Q5F1R6 531 aaKnown RBP9.86□□□□□ -0.83
NEK1-203ENST00000507142 NT5DC1Q5TFE4 455 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 SLFN11Q7Z7L1 901 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 SDCCAG8Q86SQ7 713 aaPredicted RBP9.86□□□□□ -0.83
NEK1-203ENST00000507142 TRIM48Q8IWZ4 208 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 TRAF3IP3Q9Y228 551 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 DERAQ9Y315 318 aa9.86□□□□□ -0.83
NEK1-203ENST00000507142 MARF1Q9Y4F3 1742 aaKnown RBP9.86□□□□□ -0.83
NEK1-203ENST00000507142 KCNA5P22460 613 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 PAPOLAP51003 745 aaKnown RBP9.85□□□□□ -0.83
NEK1-203ENST00000507142 GALCP54803 685 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 COL9A3Q14050 684 aaPredicted RBP9.85□□□□□ -0.83
NEK1-203ENST00000507142 LPIN1Q14693 890 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 WHAMMP3Q1A5X7 153 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 MAP7D1Q3KQU3 841 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 SYTL3Q4VX76 610 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 HHATQ5VTY9 493 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 RETSATQ6NUM9 610 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 FAM172AQ8WUF8 416 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 PIK3R5Q8WYR1 880 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 TLK1Q9UKI8 766 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 PHF24Q9UPV7 400 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 C3orf70A6NLC5 250 aaPredicted RBP9.85□□□□□ -0.83
NEK1-203ENST00000507142 CYP11B1P15538 503 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 CD44P16070 742 aaKnown RBP9.85□□□□□ -0.83
NEK1-203ENST00000507142 EIF3EP60228 445 aaKnown RBP9.85□□□□□ -0.83
NEK1-203ENST00000507142 SMAD3P84022 425 aaKnown RBP9.85□□□□□ -0.83
NEK1-203ENST00000507142 ELOA2Q8IYF1 753 aaPredicted RBP9.85□□□□□ -0.83
NEK1-203ENST00000507142 TOP6BLQ8N6T0 577 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 CHMP6Q96FZ7 201 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 WNT8AQ9H1J5 351 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 HPSEQ9Y251 543 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 SYN3O14994 580 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 POLR3GO15318 223 aaPredicted RBP9.85□□□□□ -0.83
NEK1-203ENST00000507142 NSUN2Q08J23 767 aaKnown RBP eCLIP9.85□□□□□ -0.83
NEK1-203ENST00000507142 ARMC6Q6NXE6 501 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 PDIK1LQ8N165 341 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 RAB42Q8N4Z0 105 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 SLC25A41Q8N5S1 370 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 LRRC52Q8N7C0 313 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 VPS39Q96JC1 886 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 OXCT2Q9BYC2 517 aaPredicted RBP9.85□□□□□ -0.83
NEK1-203ENST00000507142 STN1Q9H668 368 aaKnown RBP9.85□□□□□ -0.83
NEK1-203ENST00000507142 ABCC13Q9NSE7 274 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 MRPL42Q9Y6G3 142 aaKnown RBP9.85□□□□□ -0.83
NEK1-203ENST00000507142 A0A087X0B3 334 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 POC1B-GALNT4F8VUJ3 575 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 ADH1CP00326 375 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 TUBBP07437 444 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 ADRB2P07550 413 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 CHKAP35790 457 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 GJA8P48165 433 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 YWHAZP63104 245 aaKnown RBP9.85□□□□□ -0.83
NEK1-203ENST00000507142 CDR2Q01850 454 aa9.85□□□□□ -0.83
NEK1-203ENST00000507142 MAPK8IP2Q13387 824 aaPredicted RBP9.85□□□□□ -0.83
NEK1-203ENST00000507142 CENPPQ6IPU0 288 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms