RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 HERC2P3Q9BVR0 1158 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 PLEKHA5Q9HAU0 1116 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 NGRNQ9NPE2 291 aaKnown RBP10.25□□□□□ -0.77
CLCN3-205ENST00000506924 RAD18Q9NS91 495 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 SLC38A7Q9NVC3 462 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 RBAKQ9NYW8 714 aaPredicted RBP10.25□□□□□ -0.77
CLCN3-205ENST00000506924 PCDHA5Q9Y5H7 936 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 ANK1P16157 1881 aa10.25□□□□□ -0.77
CLCN3-205ENST00000506924 BIN1O00499 593 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 CLASP2O75122 1294 aaKnown RBP10.24□□□□□ -0.77
CLCN3-205ENST00000506924 URODP06132 367 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 TCF3P15923 654 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 GLUD2P49448 558 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 KCNQ1P51787 676 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 TFAMQ00059 246 aaKnown RBP10.24□□□□□ -0.77
CLCN3-205ENST00000506924 KCNB1Q14721 858 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 TMEM132DQ14C87 1099 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 PTPN14Q15678 1187 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 DUSP6Q16828 381 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 BMT2Q1RMZ1 405 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 RTP2Q5QGT7 225 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 DCLRE1AQ6PJP8 1040 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.24□□□□□ -0.77
CLCN3-205ENST00000506924 EFCAB13Q8IY85 973 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 VN1R2Q8NFZ6 395 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 GRIN3AQ8TCU5 1115 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 GPBAR1Q8TDU6 330 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 RIN2Q8WYP3 895 aaPredicted RBP10.24□□□□□ -0.77
CLCN3-205ENST00000506924 SMARCE1Q969G3 411 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 PPP2R3CQ969Q6 453 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 GAL3ST3Q96A11 431 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 FAM46AQ96IP4 442 aaKnown RBP10.24□□□□□ -0.77
CLCN3-205ENST00000506924 TIGD1Q96MW7 591 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 UROC1Q96N76 676 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 APOL5Q9BWW9 433 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 MIR1-1HGQ9H1L0 117 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 KCTD10Q9H3F6 313 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 GSX1Q9H4S2 264 aaPredicted RBP10.24□□□□□ -0.77
CLCN3-205ENST00000506924 UBE2ZQ9H832 354 aaPredicted RBP10.24□□□□□ -0.77
CLCN3-205ENST00000506924 PDE11AQ9HCR9 933 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 MRPL17Q9NRX2 175 aaKnown RBP10.24□□□□□ -0.77
CLCN3-205ENST00000506924 THEGQ9P2T0 379 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 BARX2Q9UMQ3 279 aaPredicted RBP10.24□□□□□ -0.77
CLCN3-205ENST00000506924 UBQLN1Q9UMX0 589 aaKnown RBP10.24□□□□□ -0.77
CLCN3-205ENST00000506924 NUB1Q9Y5A7 615 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 SF3B1O75533 1304 aaKnown RBP eCLIP10.24□□□□□ -0.77
CLCN3-205ENST00000506924 UBE4BO95155 1302 aa10.24□□□□□ -0.77
CLCN3-205ENST00000506924 XIRP2A4UGR9 3374 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 ZNF233A6NK53 670 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 TBX10O75333 385 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 ALX3O95076 343 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 SMC2O95347 1197 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 GLP2RO95838 553 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 EFEMP2O95967 443 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 LDHAP00338 332 aaKnown RBP10.23□□□□□ -0.77
CLCN3-205ENST00000506924 ADRB2P07550 413 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 CNPP09543 421 aaKnown RBP10.23□□□□□ -0.77
CLCN3-205ENST00000506924 SPATA31D3P0C874 917 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 ADH5P11766 374 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 GLB1P16278 677 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 TFE3P19532 575 aaPredicted RBP10.23□□□□□ -0.77
CLCN3-205ENST00000506924 KLRC2P26717 231 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 TKTP29401 623 aaKnown RBP10.23□□□□□ -0.77
CLCN3-205ENST00000506924 GBP2P32456 591 aaPredicted RBP10.23□□□□□ -0.77
CLCN3-205ENST00000506924 MCM4P33991 863 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 LTBRP36941 435 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 NDUFV1P49821 464 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 ADAM15Q13444 863 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 BMS1Q14692 1282 aaKnown RBP10.23□□□□□ -0.77
CLCN3-205ENST00000506924 ZBTB6Q15916 424 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 USP41Q3LFD5 358 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 SPATA1Q5VX52 437 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 SPATA31D4Q6ZUB0 917 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 PALB2Q86YC2 1186 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 BRSK2Q8IWQ3 736 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 CD302Q8IX05 232 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 RNF168Q8IYW5 571 aaPredicted RBP10.23□□□□□ -0.77
CLCN3-205ENST00000506924 EFHBQ8N7U6 833 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 XXYLT1Q8NBI6 393 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 BEST2Q8NFU1 509 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 CCDC127Q96BQ5 260 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 PABPC5Q96DU9 382 aaKnown RBP10.23□□□□□ -0.77
CLCN3-205ENST00000506924 EEF2KMTQ96G04 330 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 KLHL5Q96PQ7 755 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 TTPALQ9BTX7 342 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 IGSF5Q9NSI5 407 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 HOOK1Q9UJC3 728 aaKnown RBP10.23□□□□□ -0.77
CLCN3-205ENST00000506924 MAN1B1Q9UKM7 699 aa10.23□□□□□ -0.77
CLCN3-205ENST00000506924 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.22□□□□□ -0.77
CLCN3-205ENST00000506924 TEX28O15482 410 aa10.22□□□□□ -0.77
CLCN3-205ENST00000506924 EXOC3O60645 756 aa10.22□□□□□ -0.77
CLCN3-205ENST00000506924 IL18RAPO95256 599 aa10.22□□□□□ -0.77
CLCN3-205ENST00000506924 NR3C1P04150 777 aa10.22□□□□□ -0.77
CLCN3-205ENST00000506924 DLATP10515 647 aaKnown RBP10.22□□□□□ -0.77
CLCN3-205ENST00000506924 EPCAMP16422 314 aa10.22□□□□□ -0.77
CLCN3-205ENST00000506924 RPL9P32969 192 aaKnown RBP10.22□□□□□ -0.77
CLCN3-205ENST00000506924 PRCPP42785 496 aa10.22□□□□□ -0.77
CLCN3-205ENST00000506924 CASP4P49662 377 aa10.22□□□□□ -0.77
CLCN3-205ENST00000506924 DSG1Q02413 1049 aa10.22□□□□□ -0.77
CLCN3-205ENST00000506924 SNRNP35Q16560 246 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms